Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00374 ATGTCAGCAACATGTAAAGTAGGAGACAACCTAAGCTTAACCGATAAAACCAACCAACCCTTTTCACCTCCTCCGCCTATACACACCCAAAAATGTCCTGCCAATTCAGTGAAGATGCTGGTCTCAGAGCTAAGAGTTCAACGAGGAATAGCCCTTCCAATGGTGGCCATGAATTTGGCTTGGTTTGCCAAGACAGCCATCACAACAGCCTTTTTAGGCCGTCTTGGGGAGCTTAGTTTAGCAGGTGGAACTCTTGGCTTCACTTTTGCTAATGTGACTGGCTTCTCTGTCCTCAATGGTCTATGCGGTGCCATGGAACCCATATGTGGCCAGGCTCATGGTGCCAAAAACTTCAGGCTTCTTCACAAGACCCTTCTCATGACAATTATATTGTTGCTGTTGGTATCACTTCCCATCACTCTCTTGTGGCTTAATGTTGACAAAATTTTGATTCATTTTGGGCAGCAGCAAGACATCTCCATCGTGGCAAGGCGCTATGTTTCGTCTCTCATACCCGACTTATTTGTTGCCTCGATCTTCTGTCCCTTAAAAGCCTATTTGAGCTCTCAGAGCATAACTCTTCCGACCATGTTTAGTTCGGCTGTGGCACTGGCTTTCCACATACCCGTTAACATAGTTCTCTCGAAGAGGATGGGCCTCACAGGAGTTTCCATGGCGGTTTGGATAACTGATCTTATTCTTGTTGTTCTGCTAGCCATTTATGTGCTAATTCTTGAGAACAAAAAGGGAAGCATGTGGAAGGAAGGAGGGTGGTGGGATCAGAGCATTGAGGATTGGATTAGGTTAGTTAAGCTTTGTGGATCATGCTGCCTCAACACATGCCTTGAGTGGTGGTGCTATGAGATCCTAGTTTTGCTTACCGGCCACCTCACAAATGCTAAGCAAGCAGTGGGAGTTTTGGCCATTGTGCTAAACTTCGACTACTTGCTTTTCTCGGTGATGCTGTCACTGGCCACTTGTGTTTCCACTCGTGTCTCAAATGAGCTTGGTTCGAACCAAGCTGGCCTTGCCTACCGATCAGCGTACGTGTCTCTGGCATTGGGCTTTATCTGTGGTTGCATAGGTAGTTTCTTGATGGTGGCTGCCAGGGGAATTTGGGGGCCACTGTTTAGTCATGATAGGGGAATTATAAAGGGAGTAAAGAAGACGATGTTGCTGATGGCTCTGGTGGAAGTGTTTAATTTTCCTTTGGCAGTTTGTGGAGGCATAGTTCGAGGGACAGCACGACCCTGGTTGGGCATGTACGCGAATCTAGGTGGATTTTATTTCCTGGCCCTGCCACTTGGCATTGTTTTTGCCTTCAAGCTCCATCTTGGCCTTGTTGGACTCTTCATTGGACTCGTAACCGGTATAGTGACCTGCTTGACGTTGTTACTGGTATTCATTGCGCGGTTAAACTGGGCGGAAGAAGCTTCCAAGGCACAAACACTAACAGGCAACGAGCAGGTTGAGGAACTTCCGAAATATGGAGAACGAATTGACGCCCGTGAAAAAGATTAG 1521 0.4707 MSATCKVGDNLSLTDKTNQPFSPPPPIHTQKCPANSVKMLVSELRVQRGIALPMVAMNLAWFAKTAITTAFLGRLGELSLAGGTLGFTFANVTGFSVLNGLCGAMEPICGQAHGAKNFRLLHKTLLMTIILLLLVSLPITLLWLNVDKILIHFGQQQDISIVARRYVSSLIPDLFVASIFCPLKAYLSSQSITLPTMFSSAVALAFHIPVNIVLSKRMGLTGVSMAVWITDLILVVLLAIYVLILENKKGSMWKEGGWWDQSIEDWIRLVKLCGSCCLNTCLEWWCYEILVLLTGHLTNAKQAVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGSNQAGLAYRSAYVSLALGFICGCIGSFLMVAARGIWGPLFSHDRGIIKGVKKTMLLMALVEVFNFPLAVCGGIVRGTARPWLGMYANLGGFYFLALPLGIVFAFKLHLGLVGLFIGLVTGIVTCLTLLLVFIARLNWAEEASKAQTLTGNEQVEELPKYGERIDAREKD 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00374 506 Pfam MatE 276 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g00374 506 Pfam MatE 53 212 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g00374 506 MobiDBLite consensus disorder prediction 1 18 - -
Spst2g00374 506 PANTHER MULTIDRUG RESISTANCE PROTEIN 38 474 - -
Spst2g00374 506 MobiDBLite consensus disorder prediction 1 28 - -
Spst2g00374 506 NCBIfam MATE family efflux transporter 53 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g00374 506 CDD MATE_eukaryotic 43 480 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00374 Spst-Chr2 2926099 2927619 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00374 K03327 - gmx:100804083 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00374 2 2926099 2927619 Spst2g00374 2 2926099 2927619 ECH