Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00307 ATGAGGTTCATGAAGCCCTTGCAATTATTTCATGATCTGAAGAATTCAACCCGGAAGCAACGCGGAAGGTTGCTTGGTTTGGACGTCGGGGATAAATATGTTGGCCTTGCTCTTTCTGACTTCGACAACAAAATTGCTTCACCTTTCAGCGTTCTTGTTAGGAAGAAGACAAATATTAGTTTAATGGCTTCTGATTTTGAGAACCTGATCTCTAAATATTCCTTGGAAGGCTTTGTTATTGGCCTCCCTTTTGATAAAAATCGGGTGGCTTCTGATGCTGTGCAAGTGAAGGTCTTTATTGATCACCTCTGTGGGACAAAAATGCTTGAAGGAGTAAAGTATACATATTGGAATGAGTGCTTCACATCAAAGAATGTGGAATTGCTGTTAAAGCCTTTAAATTTGAATCGTCCAGTTCTCTCCAAGACTATTCTAGACAAGTTTGCAGCGGTAGGAATACTTCAGGGGTACCTGGATTTTGTCAACAGGAAAATGAAGCTAGAGTGTAGGCATGGATCAGAAATCACAACTACCTCTGAATTAAAGCTGCTGTCGACATTTATTCTTGTTGTAAATTGA 579 0.399 MRFMKPLQLFHDLKNSTRKQRGRLLGLDVGDKYVGLALSDFDNKIASPFSVLVRKKTNISLMASDFENLISKYSLEGFVIGLPFDKNRVASDAVQVKVFIDHLCGTKMLEGVKYTYWNECFTSKNVELLLKPLNLNRPVLSKTILDKFAAVGILQGYLDFVNRKMKLECRHGSEITTTSELKLLSTFILVVN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00307 192 NCBIfam Holliday junction resolvase RuvX 25 159 IPR005227 GO:0006364
Spst2g00307 192 Pfam Holliday junction resolvase 23 159 IPR005227 GO:0006364
Spst2g00307 192 SUPERFAMILY Ribonuclease H-like 22 161 IPR012337 -
Spst2g00307 192 SMART rnase_8s 22 126 IPR006641 GO:0006139
Spst2g00307 192 CDD YqgF 24 159 IPR005227 GO:0006364
Spst2g00307 192 Gene3D - 21 171 IPR037027 GO:0006139
Spst2g00307 192 Hamap Putative pre-16S rRNA nuclease [yqgF]. 22 162 IPR005227 GO:0006364
Spst2g00307 192 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 173 IPR005227 GO:0006364
Spst2g00307 192 FunFam Putative pre-16S rRNA nuclease 21 169 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00307 - - gmx:100305864 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00307 2 2377062 2380337 Spst2g00307 2 2377062 2380337 ECH