Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00282 ATGGCCGAACTCGCCAATCAAGTAGTTAAACCTCTGGGAACAAGAAGGTTCCCACCGGATTTGCTGTTCGTTACAGTTGCACTTTTGGAGAGCTTGCGGGACTTGACTAAGCTACAAAAGATCCGCCTCTTTTTAGGTAAGCCCCCAAAGAGAAATATTGTTAATCACGTAGGAGTTGGAGATGAAGAAGGAGGCGTTACAAACACGGAAAACAAACACAAACGTTTAAAGGGGGATATGGAATACATGTGTCTTGTGCATGAACACCCATATCAAGCACCCTGTATCCGTATCGAGTTAGTTGAGTCATATATCATGGGGTACAATTTGGTGTTCATTGGTGTGTTCTTGTGGAGTGCCATGGTTAGTCACAATGGACTAGCCATGATGGATGATGGGAAGTTGTTGAGTTCGTCAGGCTCACCTAATTATGACTATGCAGATGCTCTTGACAAAGCCATTTTGTTTTTTGAAGGACAACGATCAGGGAAGTTGCCCTCAAACCAAAGAGTGAAGTGGAGGGGAGACTCGGCTCTCTCTGATGGCAAACTTCAAAACGTGGATTTGGTCGGAGGATACTACGATGCTGGTGATAACGTAAAGTTTGGATGGCCAATGGCATTTGCTACTAGTTTATTGAGTTGGGCTGCTGTAGAGTATGAGAGTGAGATATCTTCAGTGAACCAGCTTGGTTATCTCCAAAGTGCTATCCGTTGGGGTGCAGACTTCATATTGAAAGCCCATACTTCCCCAACCACCCTCTATACACAGGTGGGAGATGGGAACGCTGATCACAGTTGTTGGGAGCGCCCGGAAGACATGGATACACCAAGGACAGTCTATAAGATAGACGCTAATTCTCCAGGCACTGAAGCCGCAGCTGAGTCCGCTGCTGCTCTGTCCGCTGCTTCAATTGTATTCAAGAAAATGGATCCCAAGTATTCCTCCACGCTATTAAGCCATTCAAAATCGTTGTTTGATTTTGCAGACAAGAACAGAGGTTCTTACTCAGGTTCTTGCCCATTTTATTGCTCGTACTCAGGTTACCAGGATGAACTGTTATGGGCTGCTTCTTGGCTGTACAAAGCGAGTGGAGAAAGCAAGTATCTGAGCTACACCATAGGTAACCAAGGATGGAGCCAGGCAGTGTCTGAATTCAGCTGGGATAACAAATTTGTTGGAGCTCAGACATTACTAACTGAGGAATTCTATGGTGGGAAGAAAGACTTGGCCAAGATTAAGAGTGACGCTGAGTCTTTTGTATGTGCAGTGATGCCTGGAAGTAGCTCTCAACAGATTAAAAGAACTCCTGGTGGCCTTCTGTTTACCAGAGATAGTAGCAATTTGCAATACGCCACAAGCTCAACCATGGTGCTATTCATTTTCTCTAAAATCCTAGACAGAAATCATATCAATGGAGTCAATTGTGGTTCGGCTCATTTCACACCGTCTCAAATTAGAGGCTTTGCCAAAACACAGGTGGACTACATATTAGGAAACAATCCGATGAAGATGTCATACATGGTAGGATTTGGCAGTAAATACCCAAAGCAATTACATCACCGAGCCTCATCCATCCCTTCAATCAAACTTCACCAGGCCAAGGTGGGTTGCAACGATGGTTTCTCAGATTATTACAATTCTGCTAATCCAAATCCCAACACTCATGTGGGTGCCATTGTTGGAGGCCCCGATTCAAATGATCATTTCAATGATGCAAGATCTGATTATTCCCACAGCGAACCTACCACATACATGAATGCTGCTTTCGTGGCTTCAGTATCTGCTTTGCTTGGCAAAACGCTCCAAATTAAACCAAATTGA 1824 0.4441 MAELANQVVKPLGTRRFPPDLLFVTVALLESLRDLTKLQKIRLFLGKPPKRNIVNHVGVGDEEGGVTNTENKHKRLKGDMEYMCLVHEHPYQAPCIRIELVESYIMGYNLVFIGVFLWSAMVSHNGLAMMDDGKLLSSSGSPNYDYADALDKAILFFEGQRSGKLPSNQRVKWRGDSALSDGKLQNVDLVGGYYDAGDNVKFGWPMAFATSLLSWAAVEYESEISSVNQLGYLQSAIRWGADFILKAHTSPTTLYTQVGDGNADHSCWERPEDMDTPRTVYKIDANSPGTEAAAESAAALSAASIVFKKMDPKYSSTLLSHSKSLFDFADKNRGSYSGSCPFYCSYSGYQDELLWAASWLYKASGESKYLSYTIGNQGWSQAVSEFSWDNKFVGAQTLLTEEFYGGKKDLAKIKSDAESFVCAVMPGSSSQQIKRTPGGLLFTRDSSNLQYATSSTMVLFIFSKILDRNHINGVNCGSAHFTPSQIRGFAKTQVDYILGNNPMKMSYMVGFGSKYPKQLHHRASSIPSIKLHQAKVGCNDGFSDYYNSANPNPNTHVGAIVGGPDSNDHFNDARSDYSHSEPTTYMNAAFVASVSALLGKTLQIKPN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00282 607 Gene3D - 141 606 IPR012341 GO:0005975
Spst2g00282 607 FunFam Endoglucanase 142 602 - -
Spst2g00282 607 Pfam Glycosyl hydrolase family 9 146 592 IPR001701 GO:0004553|GO:0005975
Spst2g00282 607 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 496 522 IPR018221 -
Spst2g00282 607 SUPERFAMILY Six-hairpin glycosidases 143 599 IPR008928 GO:0005975
Spst2g00282 607 PANTHER ENDO-1,4-BETA-GLUCANASE 129 598 - -
Spst2g00282 607 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 570 588 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00282 Spst-Chr2 2140040 2144197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00282 127 598 Glycoside Hydrolase AT4G23560 70.763 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00282 - - gmx:547834 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00282 2 2140040 2144197 Spst2g00282 2 2140040 2144197 ECH