Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00278 ATGAGGGTGTTTCCTAGAATCAAATACCTGTCAAGAGCAGTGCACGAGGAACAAGAACAAGAGCATGATGAGGAGAAAAACAACGCAGAAAAGTTGTGCACGTCCCTCACAGTTTGGAGGAAATCCTTGGTGATGAGTTGCAAAGGATTCACGGTCATCGATTCTTTCGGAAATTTGGTGTATCGGGTGGACAATTATATTGGTCGACCCAACGAAGTCACTCTCATGGATGCCTCGGGAAAATCTATCCTCACCATGCTCCGCCGTAGGAGGCTTGGATTGTTGGATAGTTGGTTTGTGTATGAAGGGGAAGTGGGGAACATTCGTAGGAGGCCATCAAAGAGTCCAATTTGTTGTGTAAGGAAACATGTCAATATTTTACATGGGAACACCAACGTTCTGGCCTACGTGTACCGTGGAGTCTCACATTCAGGGAAAGGGTGTGTAGCGTTTACTGTAGAGGGTTCCTACGCACATCGTACGTGTAAGGTGTTGGATGAGTGCAGAAGGGTCGTGGCTGAAATTAAGAAGAAGGAAGCTCATACCAAAAACGTCTCTTTTGGGATAGAGATTTTCCAGTTGGTTGTGCACCCTGGCTGTGACCCTGCCTTTGCCATGGCACTCGTCTTACTCCTCGATCAAATGTTTTCGTGA 654 0.4664 MRVFPRIKYLSRAVHEEQEQEHDEEKNNAEKLCTSLTVWRKSLVMSCKGFTVIDSFGNLVYRVDNYIGRPNEVTLMDASGKSILTMLRRRRLGLLDSWFVYEGEVGNIRRRPSKSPICCVRKHVNILHGNTNVLAYVYRGVSHSGKGCVAFTVEGSYAHRTCKVLDECRRVVAEIKKKEAHTKNVSFGIEIFQLVVHPGCDPAFAMALVLLLDQMFS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00278 217 Gene3D - 29 217 IPR038595 -
Spst2g00278 217 SUPERFAMILY Tubby C-terminal domain-like 32 216 IPR025659 -
Spst2g00278 217 PANTHER - 33 216 IPR007612 -
Spst2g00278 217 Coils Coil 12 35 - -
Spst2g00278 217 Pfam LURP-one-related 30 210 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00278 Spst-Chr2 2106748 2107527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00278 - - gmx:100779188 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00278 2 2106748 2107527 Spst2g00278 2 2106748 2107527 ECH
Spst2g00278 2 2106748 2107527 Spst3g01058 3 13932983 13934139 PCT