Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00260 ATGATGGATGAACATATTTATGATGGTCTTGATGGTGAGAGAGGGATGACTGACATATTGAGGATATTGCATTTGAAAACTTCTAATTCTGGTTCAAGTTCTGAAGGAGGAAGAGGACCACCATCACCAGCCAACAAAGCAGTTCAAACTGGAGTTGAACTCGTCAACGACAAGAATGGAATACCCCGACTCGTGCTCCGAAACAATGGAGCTTCTGCAACTGTTAGTTTGTTAGGAGGTCAGGTTATTTCTTGGAAAACAAAAAGAGCAGAGGAGTTACTCTTCCTAAGCAGCAAAGCAATATTTGATCCTCCCACAGCTGTACGCGGAGGAATTCCAATCTGTTTTCCACAATTTGGGAATTCGGGAACACTGGAGCGGCATGGATTTGCGAGAAACAGGATCTGGATTATTGAAAATAATCCTCCACATCTTGCCGGAGATTTCACCGAGAAAGTGTATGTTGATTTGCTGCTTAAACCATACGAAGAAGATGCGAAAATATGGCCACACAACTTCGAGTTTCGTTTAAGGATTTCTTTGGCAGCAGATGGCATTCTGAATTTGACTTCGCGCATCAGAAACGTGGATAGCAAGAATTTCAGTTTCTCCATTGCCTATCATACATATTTCTCCGTCTCTGATATTAGTGAAGTGAGAGTAGAAGGGTTGGAAACTCAATATTACCTGGACAACCTCCTGCAGAGGCAACGTTTTACAGAACAAGGAGGTGCTTTGACATTTGAATCAGAGGTTGATAGGATCTACATTGATTCTAACAATGTGATAGCTGTCATGGATCACCAAAAGAAGAGAACGTTTGTGATACGAAAGGATGCAGGACTTCCGGATGTTGTTGTTTGGAACCCTTGGGAAAGAAAGTCCAAGTCCATTGTAGATTTAGGAGATGAAGAGTACAAGCAAATGCTGTGTGTTGATGGTGCAGCAGTTGAAAACCCAATCACCCTCAAGCCAGGAGAAGAATGGACAGGTCGCTTAGAACTGTCACTTCTTCAATCTTCTTGA 1026 0.424 MMDEHIYDGLDGERGMTDILRILHLKTSNSGSSSEGGRGPPSPANKAVQTGVELVNDKNGIPRLVLRNNGASATVSLLGGQVISWKTKRAEELLFLSSKAIFDPPTAVRGGIPICFPQFGNSGTLERHGFARNRIWIIENNPPHLAGDFTEKVYVDLLLKPYEEDAKIWPHNFEFRLRISLAADGILNLTSRIRNVDSKNFSFSIAYHTYFSVSDISEVRVEGLETQYYLDNLLQRQRFTEQGGALTFESEVDRIYIDSNNVIAVMDHQKKRTFVIRKDAGLPDVVVWNPWERKSKSIVDLGDEEYKQMLCVDGAAVENPITLKPGEEWTGRLELSLLQSS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00260 341 PIRSF PHexose_mutarotase 43 341 IPR025532 -
Spst2g00260 341 Pfam Aldose 1-epimerase 63 335 IPR008183 GO:0005975|GO:0016853
Spst2g00260 341 CDD D-hex-6-P-epi_like 63 336 IPR025532 -
Spst2g00260 341 Gene3D - 43 339 IPR014718 GO:0030246
Spst2g00260 341 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 53 340 - -
Spst2g00260 341 SUPERFAMILY Galactose mutarotase-like 57 335 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00260 Spst-Chr2 1984728 1990493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00260 K01792 - gmx:100782696 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00260 2 1984728 1990493 Spst2g00260 2 1984728 1990493 ECH
Spst2g00260 2 1984728 1990493 Spst3g01036 3 13683287 13685472 PCT