Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00251 ATGTCTTCGTCGAAGGAGGCGGACCCAACCCTGGGTTATCTCACGCGGAAGGACACGGAGGTGAAGCTTCCGCGTCCAACCAGGGTCAAGAACAAAACCCCTGCTCCAATCCAAATCACCGCCGAGCAAATTCTCCGGGAGGCTCGGGAGCGTCAAGAAGCGGAGATCCGCCCTCCCAAGCAGAAAATCACCGACTCCACGGAGCTCGGCGAGTACCGTCTCCGCAAGCGCAAGGAGTTCGAGGACCTTATCCGCCGCGTTCGATGGAACATTGGCGTGTGGATCAAGTACGCGCAGTGGGAGGAATCGCAGAAGGATTTCAAACGCGCGCGTTCCGTTTGGGAGAGAGCGCTGGAGGTGGATTACAAGAACCACACCCTCTGGCTCAAGTACGCAGAGGTCGAGATGAAGAATAAGTTCGTAAACCACGCACGCAACGTGTGGGACCGTGCTGTCACTCTTCTTCCGAGGGTTGATCAATTGTGGTATAAGTACATCCACATGGAGGAAATGCTCGGCAATGTCGCCGGCGCGAGGCAGGTATTTGAGAGGTGGATGAAGTGGACGCCGGACCAGCAGGGATGGCTGTCCTACATAAAGTTTGAACTTAGATACAGTGAAATTGAGCGCGCCAGAGGGATTTTCGAGCGGTTTGTGGACTGCCACCCTAGGGTTGGGGCTTGGATACGCTATGCAAAGTTTGAGATGAAGAATGGCGAGGTTGGGAAGGCTAGGAGCGTATACGAGAGAGCCGTGGATAAGCTCTCTGATGATGAGGAAGCAGAGCAGTTATTTGTTGCTTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACTGAGCGTGCAAGAGCTATCTATAAGTTTGCTCTTGATCATATTCCCAAGGGAAGGGCGGAAGATTTGTATAGAAAGTTTGTGGCATTTGAGAAGCAGTATGGAGATAGGGAAGGGATCGAGGATGCCATCGTTGGGAAGAGAAGGTTTCAGTATGAGGATGAAGTGAAGAAGAATCCGTTGAATTATGATTCCTGGTTTGATTACATAAGGTTGGAGGAAAGTGTTGGGGATAAGGAAAGGATCAGGGAGGTTTATGAAAGAGCTATAGCCAATGTTCCCCCGGCCGAGGAGAAGCGCTACTGGCAGCGTTATATATATTTGTGGATTAATTATGCACTCTATGAAGAGCTCGATGCTGGGGATGCGGAGCGAACGAGGGATGTATATAGGGAATGCCTCAACCAGATACCTCACCACAAGTTCTCGTTTGCAAAAATATGGCTTCTAGCAGCTCAGTTTGAAATACGTCAGCTGAATCTCAAAGCTGCTCGTCAAATATTAGGAAATGCCATTGGAAAGGCTCCTAAAGATAAGATTTTTAAAAAGTATATAGAGATAGAACTGCAGCTTGGTAACATAGACCGGTGCAGAAAACTGTATGAAAAATATCTGGAGTGGTCTCCAGAAAATTGTTATGCTTGGAGCAAGTATGCTGAGTTGGAGAGATCGTTATCTGAGACTGAACGAGCCCGAGGAATTTTTGAGCTTGCAATTGCCCAACCAGCATTGGACATGCCTGAGCTATTGTGGAAGGTTATGGTGGATGTCATGGGTGGTGGTTGTGAGGTGTGTGGGTTGCCAAGGTATGGTGTAACTCATGGCCAAGAAGAACCAAGGAGGAAAGTAGAAGAAATGTACAATGGAAAGAGTGATGTGGGACTTCCAACACTTGGAAACTATCAAGAACATGACACGAGAACTATAGAGAGGAAATTTTCCTCTTGTGCCACTCGCTCTGAGCAGGCATTCGTCGACTTTGAAACTGATGAGGGTGAATTTGAGAGAGCAAGAGCACTTTATGAAAGGCTTCTTGACCGAACAAAGCACTTGAAAGTATGGATAAGCTATGCGGAATTTGAGGCAACAGCTATGGATACCGACAGTTTTGAACATAAGTGGGATAATTTTCTGAATCTCTTTATATTGTTTGTGCCTGCAACAGGGGTGTTTGAAAAAGCTCTCAACTACTTCAGGTCATCAGCTCCAGATTTGAAAGAAGAAAGGGCAATGCTATTGGAAAAATGGCTCAACATGGAGACTACATTTGGACAGCTGGGTGATGTTAGCTTAGTCCAGTCTAAGCTGCCCAAGAAGCTCAAGAAGAGAAGGCATGTTGCCACTGAAGATGGTTCTACTAGAATTGAAGAATTCATCGACTTTTTGTTCCCTGAGGAAAGCCAGACAACTAATCTCAAGATCTTGGAAGCTGCTTACAAATGGAAAAAGCAAAAATTGTCTTCCGATGATTAA 2304 0.4692 MSSSKEADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNIGVWIKYAQWEESQKDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFVNHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWTPDQQGWLSYIKFELRYSEIERARGIFERFVDCHPRVGAWIRYAKFEMKNGEVGKARSVYERAVDKLSDDEEAEQLFVAFAEFEERCKETERARAIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVKKNPLNYDSWFDYIRLEESVGDKERIREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDAERTRDVYRECLNQIPHHKFSFAKIWLLAAQFEIRQLNLKAARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLSETERARGIFELAIAQPALDMPELLWKVMVDVMGGGCEVCGLPRYGVTHGQEEPRRKVEEMYNGKSDVGLPTLGNYQEHDTRTIERKFSSCATRSEQAFVDFETDEGEFERARALYERLLDRTKHLKVWISYAEFEATAMDTDSFEHKWDNFLNLFILFVPATGVFEKALNYFRSSAPDLKEERAMLLEKWLNMETTFGQLGDVSLVQSKLPKKLKKRRHVATEDGSTRIEEFIDFLFPEESQTTNLKILEAAYKWKKQKLSSDD 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00251 767 FunFam Crooked neck-like protein 1 325 522 - -
Spst2g00251 767 SMART hat_new_1 354 388 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 276 310 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 71 103 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 105 137 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 436 467 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 320 352 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 503 537 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 206 237 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 469 501 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 139 171 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 239 274 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 398 434 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 173 204 IPR003107 GO:0006396
Spst2g00251 767 SMART hat_new_1 609 640 IPR003107 GO:0006396
Spst2g00251 767 SUPERFAMILY TPR-like 290 529 IPR011990 GO:0005515
Spst2g00251 767 SUPERFAMILY TPR-like 195 319 IPR011990 GO:0005515
Spst2g00251 767 Gene3D Tetratricopeptide repeat domain 583 739 IPR011990 GO:0005515
Spst2g00251 767 SUPERFAMILY TPR-like 598 699 IPR011990 GO:0005515
Spst2g00251 767 Pfam Tetratricopeptide repeat 466 488 IPR019734 GO:0005515
Spst2g00251 767 SUPERFAMILY TPR-like 81 206 IPR011990 GO:0005515
Spst2g00251 767 MobiDBLite consensus disorder prediction 11 27 - -
Spst2g00251 767 Gene3D Tetratricopeptide repeat domain 123 322 IPR011990 GO:0005515
Spst2g00251 767 Gene3D Tetratricopeptide repeat domain 323 536 IPR011990 GO:0005515
Spst2g00251 767 FunFam Cell cycle control protein 121 324 - -
Spst2g00251 767 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Spst2g00251 767 PANTHER PRE-MRNA SPLICING FACTOR 24 762 IPR045075 GO:0000398
Spst2g00251 767 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00251 Spst-Chr2 1937116 1942775 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00251 K12869 - gmx:100811745 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00251 2 1937116 1942775 Spst2g00251 2 1937116 1942775 ECH