Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00245 ATGGCGAAGGAGTTGTTGACTCTTGATGATGCCACCACCTGCACATCTTGGAATTTTTCCGGTACCAGACTCGCTGCTGCTTCCGCCGATGGCACGCTCTCAATCTTCGATTCCCGCAATCCACCTTCTTCTTCCTCCCTCCGCTCTACTTTTAAATTTAGGGTTCTAGAAGGGAACATCGTCAAGATTGTTTGGGTTCCGCCAGAATATGGAGATGCAGTTGCGTGTATTTCCGCCGATGGAATTGTGTCATTGTGGGAGGAGGTTGCAGAAGATACCCAGTCTCTTCAGTGGAAGATGTGCAAAAGCTTTGGAAACAGTTCAAACAAAGTCCTTGATGTTCAATTTGGGATCTCTTTGACTTGTTTGAAAATGGTTGCTGCATATTCAGATGGCAATATAAGAGTTTTTGAGCTCTTGGACCCCTTAGAACTTAGAAACTGGCAGCTTCAGGCTGAATTTCAAAATGTTATCGAATCAGTGTCTGCATTTGGAAAGGCTTCATGCCTCTCTGCATCCATTTCTTGGAATCCACAAAAAGGTGGAAGCCAAGAATCAAGCTTCCTTATAGGTTTTAATTCAAATACATCAGAGCTTAATTCTTCCAAGGTATGGGAATTTGATCAGGCTCATCAAAGATGGCTCCCGGTAGCAGAATTGGCACTTCCTGAAGACAAGGGTCATCAGGTTTATGCTGTGGCATGGGCACCAAATATTGGCAGACCGTATGAGATCATAGCGGTTGCAACTGACAAGGGACTTGCGATATGGCATGTAGGATTGAACCCTGATCATGATGGAAGACTTCCAGTAAAGAGAGTTGCACTACTGTCAGGTCACGAGGGCATGGTGTGGCAAATGGAGTGGGATATGAGTGGAATGACTTTGGCTACTACAGGTGAAGATGGAATGGTCCGATTATGGCAGTCTAATCTCAATGGTGTTTGGCATCAGCAAGCTGCATTTGAACCCATTTCGTAG 981 0.4506 MAKELLTLDDATTCTSWNFSGTRLAAASADGTLSIFDSRNPPSSSSLRSTFKFRVLEGNIVKIVWVPPEYGDAVACISADGIVSLWEEVAEDTQSLQWKMCKSFGNSSNKVLDVQFGISLTCLKMVAAYSDGNIRVFELLDPLELRNWQLQAEFQNVIESVSAFGKASCLSASISWNPQKGGSQESSFLIGFNSNTSELNSSKVWEFDQAHQRWLPVAELALPEDKGHQVYAVAWAPNIGRPYEIIAVATDKGLAIWHVGLNPDHDGRLPVKRVALLSGHEGMVWQMEWDMSGMTLATTGEDGMVRLWQSNLNGVWHQQAAFEPIS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00245 326 SMART WD40_4 1 37 IPR001680 GO:0005515
Spst2g00245 326 SMART WD40_4 46 87 IPR001680 GO:0005515
Spst2g00245 326 SMART WD40_4 270 309 IPR001680 GO:0005515
Spst2g00245 326 SMART WD40_4 213 258 IPR001680 GO:0005515
Spst2g00245 326 SMART WD40_4 97 138 IPR001680 GO:0005515
Spst2g00245 326 FunFam Nucleoporin SEH1 9 324 - -
Spst2g00245 326 SUPERFAMILY WD40 repeat-like 11 309 IPR036322 GO:0005515
Spst2g00245 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 277 309 - -
Spst2g00245 326 Gene3D - 3 323 IPR015943 GO:0005515
Spst2g00245 326 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Spst2g00245 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 309 IPR001680 GO:0005515
Spst2g00245 326 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 7 322 IPR037363 GO:0005198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00245 K14299 - gmx:100780788 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00245 2 1906682 1908988 Spst2g00245 2 1906682 1908988 ECH