Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00223 ATGAAACTGAAACATGAAGAATCATCGTCATTCATCAAATTCCATATGTCAAGGCATCAATGCAATACCAGCATTTTTGGCCTCTCTTTCTCTTTCATTTTCTCCTTATGGTGCCTCCTCTTCTTCTACATCAAGCTTCGTCTCGTTCATGGCACTGGAGCTATGTTAGAGTTCAATGAACCAGGTAGCTCCAACGCCATTCAGAAACTTGCAAAACCCTTGTACTCTCTTCCTGAAACGACTAGTATAGAACAAGTGTTTTGGCACGTTTTAGGAAATGGTAGTAATTTGGTGTGCAAACTACATCCTCCACAAGACGAAAATAAACTGCAACAAATTCCTGATGGGAAACTTCACGCCAATTATGATGAATTTCAAAATATGGGAGAAGCACAAGAAAAAACAAAGGGCATGGACTCTGCGCTTGTTAACATAACTCACAGGCTAGAATCTGATGGCTCTGTGTACAACTATGCCTCTGAGTCCAAAGGTGCAAAGGTGGTGGCCCATAATAAGGAGGCCAAAGGTGCAACAAATATACTCGGGAAGGATCATGACAAGTACCTGAGAAACCCTTGTTCTGTTGAAGGAAAGTTTGTTGTTATTGAGCTTTCAGAAGAGACCCTGGTTGATTCTGTGAAGATTGCAAACTTTGAGCATTATTCTTCTAACTTCAAGGAGTTTGATTTGGCGGGAAGTTTGAGCTATCCAACTGAAGAATGGAGCATGCTGGGACACTTTATTGCTGCCAATGTCAAGCATGCACAGCTATTTAAGCTGCCAGAGCCCAATTGGGTAAGGTATTTAAAGTTGACCTTGCTTAGTCATTATGGATCTGAGTTTTACTGCACACTTAGTGTTGTAGAAGTTTACGGGATCAATGCAATAGAGCGGATGCTTAAGGATCTAATTGTGGCTTCTGTGGGATCCATTCCTGATAAGCCACCCGTGGATAATATCAGTGACATCCCGTCTTTGAAATCAGAAGACGGTCACATTCATAAAAATGGAAAAAAAGTTGATAATAAGAATGATACTGTGGCTGCTCAGATATCAAGCAATGATACCAGTCGAGAGAATGATGCAGAAGCGGTCAAAACAACAATGACCGCGAACTTGATTCCAGATCCTGTGTTAGAACTTAGACAACAGCTAAATGGTAGGGTAGCTGGTGACACTGTACTGAAGATTTTGATGAAGAAAGTGAGGTCAGTGGAGGTAAACTTATCAGCCCTTGAGGATTACCTCAAAGAATTGAACAGGAGACAAGGATCTAAAATACCGGATCTTGAGAAAGAGTTGTCCAAACTATCAGAAAGTCTTGAACAAAGCAAGTCAGAGATTAAAGATCTCTGGCAGTGGAACACAAATATGGAAAAAGGAATATCTGAGATTGAGTCTTGGAAAGATGCTGTCTCATCTCAGCTTAATGAATTAGCCAGAGAAAACAGCATGCTAAGATCAGATGTTCGAAAGATTGCATGTAATCAAGCAAATATGGAAGCCAAAGAACTTGCCGTGTTAGCAACGAGTCTTGTTTTTGTGTGCCTTGCAGTTCTCAAGATAGTTTCGGTACACATGTTGAGGTTTTCTGCATCATATAATGCAAATAAAGTGCGCCAGACAATTAGAGGATGGGAGTAA 1644 0.4075 MKLKHEESSSFIKFHMSRHQCNTSIFGLSFSFIFSLWCLLFFYIKLRLVHGTGAMLEFNEPGSSNAIQKLAKPLYSLPETTSIEQVFWHVLGNGSNLVCKLHPPQDENKLQQIPDGKLHANYDEFQNMGEAQEKTKGMDSALVNITHRLESDGSVYNYASESKGAKVVAHNKEAKGATNILGKDHDKYLRNPCSVEGKFVVIELSEETLVDSVKIANFEHYSSNFKEFDLAGSLSYPTEEWSMLGHFIAANVKHAQLFKLPEPNWVRYLKLTLLSHYGSEFYCTLSVVEVYGINAIERMLKDLIVASVGSIPDKPPVDNISDIPSLKSEDGHIHKNGKKVDNKNDTVAAQISSNDTSRENDAEAVKTTMTANLIPDPVLELRQQLNGRVAGDTVLKILMKKVRSVEVNLSALEDYLKELNRRQGSKIPDLEKELSKLSESLEQSKSEIKDLWQWNTNMEKGISEIESWKDAVSSQLNELARENSMLRSDVRKIACNQANMEAKELAVLATSLVFVCLAVLKIVSVHMLRFSASYNANKVRQTIRGWE 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00223 547 SUPERFAMILY Galactose-binding domain-like 194 291 IPR008979 -
Spst2g00223 547 Coils Coil 427 447 - -
Spst2g00223 547 PANTHER MEMBRANE PROTEIN CH1 RELATED 111 539 IPR045120 GO:0016020
Spst2g00223 547 ProSiteProfiles SUN domain profile. 135 295 IPR012919 -
Spst2g00223 547 Gene3D - 170 303 - -
Spst2g00223 547 Pfam Sad1 / UNC-like C-terminal 170 292 IPR012919 -
Spst2g00223 547 Coils Coil 402 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00223 Spst-Chr2 1702196 1705234 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00223 - - gmx:102668828 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00223 2 1702196 1705234 Spst2g00223 2 1702196 1705234 ECH