Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00219 ATGGGGTTCGCTTTGCCGTACACAGCTTCAACCTCCGCTAATCTTCCGAACCTTCAATATCACTCTCTCTTTGCTGCATTGAGATCGAAACCTTCGCTCTATCTATTTGCTGCATTGAGATCGAAACCTTCAACCAAACGCATTCGAAAACGTTTTCCAATTATTCGCGCTAAATCTGAAAATGGAGCTCTGGTTAACTCTGAGAAGCCCGACACTAATTACGGAAGGAAATACTTCCCCCTCGCTGCTGTTGTCGGCCAAGATGCTATAAAAACTGCTCTTTTACTCGGGGCAATTGACCCTGGGATTGGAGGAATTGCTATATCGGGAAAGCGAGGAACTGCCAAAACTGTAATGGCACGAGGATTGCATGCAGTACTGCCTCCTATTGAAGTAGTAGTAGGTTCCATAGCCAATGCAGATCCATCTTACCGAGAAGAGTGGGAAGATGGTCTACCAGAACGCCTGGAATATGATTCTGCTGGAAATATTAAAACTCGGATTGTGAAGTCTCCCTTTGTTCAGATTCCTCTTGGAGTAACGGAGGACAGACTCATTGGATCAGTTGATGTTGAGGAGTCTGTGAAAACAGGCACAACTGTTTTCCAGCCAGGCTTACTTGCAGAAGCTCATAGAGGTGTTTTATATGTTGATGAAATTAATCTTTTGGATGAGGGTATCAGTAATTTGCTCCTTAATGTATTGACCGAAGGAGTAAATACTGTTGAAAGAGAGGGTATCAGCTTTAAGCACCCTTGTAGGCCCCTTCTCATTGCCACCTATAACCCAGATGAGGGTGCTGTTCGTGAACATCTGCTAGATCGCATTGCAGTTAATTTAAGTGCAGATCTTCCAATGAGTTTTGAAAACCGTGTTGCAGCTGTTGGAATTGCTACAGTGTTTCAGGAGAACAGTAGTCAAGTATTTGAAATGGTTGAAGAGGAAACCGACAATGCCAAAACTCAGATCATCTTGGCCAGAGAGTATCTAAAAGATGTTACTATTAGCAGAGAACAATTAAAATACCTGGTCATTGAAGCTTTACGTGGTGGTTGCCAGGGACATAGACCTGAGCTATTTGCTGCCCGTGTTGCAAAGTGCTTAGCTGCTCTGGAGGGACGTGAGAAGGTTTACGTGGATGACCTAAAAAAAGCAGTAGAATTGGTCATTCTGCCCCGGTCAATTGTTACTGAGAGCCCACCGGATCAACAAAATCAGCCTCCTCCTCCACCTCCTCCACAAAATCAAGAATCAGGCGAAGAACAGAATGAAGAGGAAGAGCAAGAGGATGATAAGGACGAAGAGAATGAACAACAACAAGAACAATTACCGGAAGAGTTTATCTTTGATGCTGAAGGGGGCTTGGTAGATGAAAAACTCCTTTTCTTTGCCCAACAAGCACAGAGACGCCGTGGGAGGGCTGGCAGGGCGAAAAATGTTATATTTTCAGAGGATAGAGGTCGATACATCAAGCCAATGCTTCCAAAGGGCCCTGTAAAGAGATTAGCAGTTGATGCAACCCTCAGAGCTGCTGCACCCTATCAAAAATTGCGAAGGGCAAAAGACTCTGGAAACAGTAGAAAAGTATTTGTGGAGAAAACTGACATGAGGGCAAAGAGAATGGCACGGAAAGCAGGAGCATTGGTGATATTTGTGGTTGATGCAAGTGGAAGCATGGCATTGAACAGGATGCAGAATGCAAAAGGTGCAGCACTTAAGCTTCTGGCTGAGAGTTATACAAGCAGGGATCAGGTGTCTATAATTCCATTCCGTGGAGATGCGGCTGAAGTTCTCCTGCCACCGTCTAGATCAATTGCGATGGCAAGGAAACGGCTTGAGAGGCTTCCATGTGGTGGAGGGTCCCCACTTGCTCATGGTCTAACAACGGCTGTTAGGGTTGGATTAAATGCGGAGAAAAGTGGTGACGTTGGACGTGTAATGATTGTTGCAATCACTGATGGTAGAGCCAATATATCGTTGAAAAGGTCAACTGACCCTGAAGCTGCTGTGGCTACTGATGCCCCAAAACCTTCAGCGCAAGAATTGAAGAATGAAATTCTTGAGGTGGCTGGGAAGATATATAAGGCAGGAATGTCTCTCCTTGTAATCGACACTGAGAATAAGTTTGTCTCAACGGGTTTCGCCAAGGAGATTGCTAGAGTTGCCCAAGGGAAGTATTATTATCTGCCGAATGCTTCAGACGCTGTTATCTCATCGGCAACAAAGGAAGCTTTAACAGCTTTGAAAAGTTCATGA 2256 0.4486 MGFALPYTASTSANLPNLQYHSLFAALRSKPSLYLFAALRSKPSTKRIRKRFPIIRAKSENGALVNSEKPDTNYGRKYFPLAAVVGQDAIKTALLLGAIDPGIGGIAISGKRGTAKTVMARGLHAVLPPIEVVVGSIANADPSYREEWEDGLPERLEYDSAGNIKTRIVKSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISNLLLNVLTEGVNTVEREGISFKHPCRPLLIATYNPDEGAVREHLLDRIAVNLSADLPMSFENRVAAVGIATVFQENSSQVFEMVEEETDNAKTQIILAREYLKDVTISREQLKYLVIEALRGGCQGHRPELFAARVAKCLAALEGREKVYVDDLKKAVELVILPRSIVTESPPDQQNQPPPPPPPQNQESGEEQNEEEEQEDDKDEENEQQQEQLPEEFIFDAEGGLVDEKLLFFAQQAQRRRGRAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLRRAKDSGNSRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQNAKGAALKLLAESYTSRDQVSIIPFRGDAAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVRVGLNAEKSGDVGRVMIVAITDGRANISLKRSTDPEAAVATDAPKPSAQELKNEILEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISSATKEALTALKSS 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00219 751 CDD vWA_Magnesium_chelatase 547 742 IPR041702 -
Spst2g00219 751 ProSiteProfiles VWFA domain profile. 548 745 IPR002035 -
Spst2g00219 751 Pfam AAA lid domain 346 404 IPR041628 -
Spst2g00219 751 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLD, CHLOROPLASTIC 75 751 - -
Spst2g00219 751 NCBIfam magnesium chelatase ATPase subunit D 88 738 IPR011776 GO:0005524|GO:0015995|GO:0016851
Spst2g00219 751 Gene3D - 328 410 - -
Spst2g00219 751 Coils Coil 418 443 - -
Spst2g00219 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 395 IPR027417 -
Spst2g00219 751 Pfam von Willebrand factor type A domain 549 654 IPR002035 -
Spst2g00219 751 MobiDBLite consensus disorder prediction 397 441 - -
Spst2g00219 751 FunFam Mg-protoporphyrin IX chelatase 538 744 - -
Spst2g00219 751 CDD AAA 85 276 - -
Spst2g00219 751 SUPERFAMILY vWA-like 549 735 IPR036465 -
Spst2g00219 751 SMART VWA_4 546 741 IPR002035 -
Spst2g00219 751 Pfam Magnesium chelatase, subunit ChlI 198 266 IPR000523 GO:0005524
Spst2g00219 751 Gene3D von Willebrand factor, type A domain 549 741 IPR036465 -
Spst2g00219 751 SMART AAA_5 102 283 IPR003593 GO:0016887
Spst2g00219 751 Gene3D - 76 282 IPR027417 -
Spst2g00219 751 MobiDBLite consensus disorder prediction 419 441 - -
Spst2g00219 751 MobiDBLite consensus disorder prediction 402 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00219 Spst-Chr2 1673595 1683979 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00219 K03404 - gmx:100775919 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00219 2 1673595 1683979 Spst2g00219 2 1673595 1683979 ECH