Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00030 ATGGCGTCCTCTTCTTCTCCGTCGGAAGGTATAGGTTTAGGGTTATCGGAAGAAGATTACGACCAAATCTATGGCTCTGAATCGGGATGGGTGGAGGCTCGAACTTCATGCGATCACCTGCCCTCCTTGTCCGCCGATCTCACCCACATTCCGCCGCCGAACACACCCTGCCACACCTGCCAACACCCCTCTGAAAACTGGTTGTGCCTCTCCTGTAAGCAGGTTCTCTGTAGCCGTTTCGTGAACAAGCACATGCTCCACCATTTCCGCCACACTAATCACTCTCTCGCCCTCAGTTTCAGTGATCTCTCCATCTGGTGTTTCTCTTGCGACGCTTACTTGGATGCTCAACTCGTTCCCCAACTGCGTCCTGTTCATCAAGTAGCTTACATAATGAAATTCGGCGAGCCTCCACCACTCCCACTTACTCAACATCAACCGTCCCCTGCAACTTCAGACCAGTAA 465 0.5226 MASSSSPSEGIGLGLSEEDYDQIYGSESGWVEARTSCDHLPSLSADLTHIPPPNTPCHTCQHPSENWLCLSCKQVLCSRFVNKHMLHHFRHTNHSLALSFSDLSIWCFSCDAYLDAQLVPQLRPVHQVAYIMKFGEPPPLPLTQHQPSPATSDQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00030 154 SMART Zf_UBP_1 56 105 IPR001607 GO:0008270
Spst2g00030 154 SUPERFAMILY RING/U-box 35 125 - -
Spst2g00030 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 31 137 IPR013083 -
Spst2g00030 154 Pfam Zn-finger in ubiquitin-hydrolases and other protein 57 115 IPR001607 GO:0008270
Spst2g00030 154 ProSiteProfiles Zinc finger UBP-type profile. 35 136 IPR001607 GO:0008270
Spst2g00030 154 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 3 148 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00030 - - aprc:113869857 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00030 2 325963 326621 Spst2g00030 2 325963 326621 ECH