Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00029 ATGGTGACGGTGATGGGTGAAGAGGCCACCAAATCCAATCCCAAACTGACCCTGTTGCCTCTCATAGCTCTAATATTCTATGAAGTATCAGGGGGTCCTTTCGGAGTAGAGGATTCCGTTAGGGGAGGGGGTGGTCCTCTTTTCTCATTACTTGGATTCTTCATTTTTCCTTTAATATGGAGTATACCAGAAGCTCTTGTTACGGCTGAACTTGCCACCACCTTCCCTCAAAATGGTGGATATGTTATATGGATTTCCTCAGCCTTTGGACCCTTTTGGGGCTTTCAGGAAGGCTTTTGGAAATGGTTCAGTGGGGTCATGGACAATGCTCTTTACCCCGTTTTGTTCCTCGATTACATCAAGCAATCCTTGCCTCTCCTTGACCGATTCACCGCTCGAGTCCCTGCTCTCTTGGGGATCACATTTTCACTAACTTACTTGAATTACCGTGGTCTTCACATTGTTGGCTTTTCTGCTGTTTTGCTTGCCCTTTTCTCACTTTCCCCATTTCTCCTAATGACCCTTCTTTCCATTCCACTAATAAGACCAAGGCGGTGGCTTGTTGTAGATTTTGGCAAGGTGGAGTGGCGAAGATACTTCAATAGTATGTTCTGGAATTTAAACTATTGGGATAAGGCAAGTACCCTTGCGGGAGAGGTTGAAAATCCAAGTAAAACGTTCCCAAAAGCACTTGTTGGAGCACTAGTCTTGGTGGTCTCCTCGTATTTGATTCCACTTCTTGCCGGAACAGGTGCTTTGGGGTCCTCGCCAAGTGAGTGGGAAGATGGTTATTTTGCACAGGTGGGGATGTTCATTGGTGGCTCTTGGCTCAAACTCTGGATTCAGGTAGCTGCTGCTATGTCTAACCTCGGCTTGTTTGAAGCAGAAATGAGCAGTGATGCTTTTCAACTTCAAGGGATGAGCAAAATGGGAATGCTTCCAGCACTATTTGCCTCAAGGTCTAAGTATGGAACGCCCACGGTTAGCATTTTGTGCTCTGCCACTGGAGTTATCTTCTTGTCGTGGATGAGCTTTCAGGAAATCATAGAGTTCCTCAATTTCTTATATGCCGTAGGAATGCTTCTTGAGTTTGCAGCTTTTATAACTTTGAGGTTGAACAAGCCAAATCTTTACAGACCTTACAGAGTTCCGTTGCCAACATTTTGGGCGGCCATGATATGTTTGCCTCCTGCATTATTGCTTATTCTTGTAATGTGCTTGGCTTCTTTGAGAACGTTCTTTGTCAGTGGAGCTGTAATTCTCCTGGGGTTCATCCTGTACCCTATCTTAGTTCAAGCCAAAAAGAAGAACTGGTTTCTGTTCGAAGAAGAACCACCCTCCTTACATTCCACTGGCTGGCGCCAATGTCACTCAGTTGTTTCAGAATTCACTGACCTCGACCGAGAAAATAAGGATGTTGAGCTTCTTGTGAGCTCACCATTTTCCAGTGTGGAAGAAGACTTGTCTTTAGTGCAAAGTGATTCTAAAGTCTAA 1494 0.4491 MVTVMGEEATKSNPKLTLLPLIALIFYEVSGGPFGVEDSVRGGGGPLFSLLGFFIFPLIWSIPEALVTAELATTFPQNGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYIKQSLPLLDRFTARVPALLGITFSLTYLNYRGLHIVGFSAVLLALFSLSPFLLMTLLSIPLIRPRRWLVVDFGKVEWRRYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALVGALVLVVSSYLIPLLAGTGALGSSPSEWEDGYFAQVGMFIGGSWLKLWIQVAAAMSNLGLFEAEMSSDAFQLQGMSKMGMLPALFASRSKYGTPTVSILCSATGVIFLSWMSFQEIIEFLNFLYAVGMLLEFAAFITLRLNKPNLYRPYRVPLPTFWAAMICLPPALLLILVMCLASLRTFFVSGAVILLGFILYPILVQAKKKNWFLFEEEPPSLHSTGWRQCHSVVSEFTDLDRENKDVELLVSSPFSSVEEDLSLVQSDSKV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00029 497 Pfam Amino acid permease 19 400 IPR002293 GO:0016020|GO:0022857|GO:0055085
Spst2g00029 497 Gene3D Amino acid/polyamine transporter I 13 444 - -
Spst2g00029 497 FunFam Amino acid permease, putative 12 442 - -
Spst2g00029 497 PIRSF AA_transporter 1 451 - -
Spst2g00029 497 PANTHER POLYAMINE TRANSPORTER PUT1 8 446 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00029 Spst-Chr2 322376 324033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00029 5 472 Organic Solute Cotransporters AT3G19553 73.597 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00029 - - vun:114172952 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00029 2 322376 324033 Spst2g00029 2 322376 324033 ECH