Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00017 ATGGCTCACGATAATTTCTACTCTAACTGTGTGTACCTGGTGCTACAGCTTCGAGTCCACTGTGCTGAGGTGTTAGGTACACCAATTGTTGGGGACTACAAGTATGGATGGCAAGCACACAGGAAGTGGGGACATTTTGATTTGTCTAGAGTGGAAGACTCCCGTGAAGAGGTTCTCAAGGGAGAAACGCTCCCCTTTGGCCATAATTTGAACAAAGGGAGCATCTCTGAGAATCATCCTCGTTTGCATCTTCATTGCAAGCAAATAGTCTTACCCAATATATCTCAAGCACTGCAAAATATGCAATCATCTTCCAATTGTGATATTTCACTAGTGGAAGGGCTTGAGTTGGTGGCGGATTTGCCTCCATACATGCAAAGAAATCGATTTCGACGAGGCAAATTCTTCCGCTCGGGTTTCCTCAGAATTCACCGGATGTTGGTTTGA 447 0.4497 MAHDNFYSNCVYLVLQLRVHCAEVLGTPIVGDYKYGWQAHRKWGHFDLSRVEDSREEVLKGETLPFGHNLNKGSISENHPRLHLHCKQIVLPNISQALQNMQSSSNCDISLVEGLELVADLPPYMQRNRFRRGKFFRSGFLRIHRMLV 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00017 148 Gene3D Pseudouridine synthase 15 106 - -
Spst2g00017 148 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 16 128 - -
Spst2g00017 148 SUPERFAMILY Pseudouridine synthase 16 93 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00017 Spst-Chr2 229816 230307 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00017 - - gmx:100779473 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00017 2 229816 230307 Spst2g00017 2 229816 230307 ECH