Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03738 ATGCTGGTTGGACCAGCTAAAGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACCTTCCAAATTGTGAATTCACTCAAGCAATTTGTTCACATTCTCAAAGGAACCATAGTCATCTCACTTCTGCAGCCAGCACCGGAGACTTACAACCTTTTTGATGACGTTATTCTACTCTCTGATAGTCTTATAGTATACCAGGGTCCCCGCGAATATGTGCTTGAATTTTTCGAATCAATGGGTTTTCAGTGTCCTGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGATCAGGAGCAGTACTGGGGACACAAAGATAAACCTTATAGATTTGTCACAGCCAAAGAGTTCTCAGAGGCACACAAGTCATTTCATGTTGGGAAAAGCCTTCGTGAAGAACTTGCTACTGAATTTGACAAGTCCAAGAGCCACCCAGCTGCTTTGACAAACAAAAAGTATGGAGTGGGAAAATGGGAACTTCTAGAAGCTTGTTTATCAAGAGAATACATACTTATTAAGCGTAATGCATTAACTTACACCTTCAAGCTTGGCCAACTTGCTGCAGAGGGATTTATTACGATGACAGTTTTTCTCCAGACTGAGAAGCACAGAGATTCTGTGATGGATGGCGGCATATATATGGGTGCATTATTTTTTAGCCTTGCTGTGATTATGTTCAATGGAATGGTTGAAATTTCCATGGTTGTTTCACGATTTCCTGTTTTCTACAAGGAAAGGGATAATCTGCTTTTTCCTTCATGGGCATATGCCCTTCCTGCATGGATCCTAAAAATCCCCATGACTTTTGTTGAAGTTGCTGTTTGGCAGATGGCTTTGGCATTATACCGATTTGTTGCAGCACTTGGGAGGGAGTTAACGGTATCTCTAACACTTGCGTCGTTTACAAATTCCATCCTTTTTGCTACGAGTGGTTTTATCCTATCAAAAGACAAAATACAAAAATGGTGGCTATGGAGTTTTTGGATATCACCCATGATGTATGGACAAAATGCCTTAGTAAATAATGAATTTCTTGGAAGGAGATGGAGACATATTTTATCTAACTCGACGGAGCCTCTAGGTGTTGAAGTTTTGAAATCCCGGGGATTTTTCACTGAGTCATACTGGTACTGGATAGGTGTTGGGGCTTTGATTGGATATACATTACTGTTCAACTTTGGCTACATCCTTGCTCTCATGTACTTGAGTTCACCCGAAAAGCACCAGGCTGTTATCTCAGATGAACCTCAACGCAATGAGAAGAATGGAGGTAGCGACAAAGGAACTAAGGTGCAGAGGCACATAGAGTATAGTTTTTCTCAGCACTCAAATAGAGTGAGCAAATTTTCTCATACTTTACCCGCTAGAGGAATGGTTCTTCCTTTTCAGCCGCATTCGATCACCTTTGATGAAGTAACATATGCTGTGGACATGCCAAAGGAAATGAAGAACCAAGGTGTTGTTGGGGATAAATTGGTTATTTTGAAGGGTGTCAGTGGAGCTTTCAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTCACTGGAGCAGGCAAAACAACACTGATGGATGTACTTGCTGGTAGAAAAACTGGAGGTTGTGTTGGAGGGAAAATCACAATCTCTGGGTATCGGAAGAATCAAGAAACATTTGCAAGGATTTCTGGATACTGTGAGCAAAATGACATCCACTCTCCTCATGTTACTGTGTATGAATCCCTGCTCTATTCAGCTTGGCTTCGATTGTCCCCCGATATCAATGCTGAAGCCAGAAGGATGTTCATTGAGGAAGTCATGGAGCTTGTGGAATTGAAGCCACTAAGGCGTGCATTAGTTGGATTGCCTGGTGTTAATGGTCTCTCAACAGAGCAACGCAAAAGGTTGACAATTGCAGTCGAACTTGTGGCAAATCCTTCCATAATATTCATGGATGAGCCAACTTCTGGGCTGGATGCAAGAGCCGCTGCTATTGTCATGAGAACAGTTAGGAACACTGTAGACACTGGAAGAACAGTTGTTTGTACCATCCATCAGCCTAGCATAGACATATTTGAATCTTTTGACGAGGTGAAAAAAAAAACAGAGTTGGTGTAG 2115 0.4194 MLVGPAKALFMDEISTGLDSSTTFQIVNSLKQFVHILKGTIVISLLQPAPETYNLFDDVILLSDSLIVYQGPREYVLEFFESMGFQCPERKGVADFLQEVTSRKDQEQYWGHKDKPYRFVTAKEFSEAHKSFHVGKSLREELATEFDKSKSHPAALTNKKYGVGKWELLEACLSREYILIKRNALTYTFKLGQLAAEGFITMTVFLQTEKHRDSVMDGGIYMGALFFSLAVIMFNGMVEISMVVSRFPVFYKERDNLLFPSWAYALPAWILKIPMTFVEVAVWQMALALYRFVAALGRELTVSLTLASFTNSILFATSGFILSKDKIQKWWLWSFWISPMMYGQNALVNNEFLGRRWRHILSNSTEPLGVEVLKSRGFFTESYWYWIGVGALIGYTLLFNFGYILALMYLSSPEKHQAVISDEPQRNEKNGGSDKGTKVQRHIEYSFSQHSNRVSKFSHTLPARGMVLPFQPHSITFDEVTYAVDMPKEMKNQGVVGDKLVILKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGCVGGKITISGYRKNQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPDINAEARRMFIEEVMELVELKPLRRALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDEVKKKTELV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03738 704 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 281 697 - -
Spst1g03738 704 FunFam ABC transporter G family member 40 489 702 - -
Spst1g03738 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 475 703 IPR003439 GO:0005524
Spst1g03738 704 Gene3D - 471 698 IPR027417 -
Spst1g03738 704 Pfam ABC-2 type transporter 169 284 IPR013525 GO:0016020|GO:0140359
Spst1g03738 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 688 IPR027417 -
Spst1g03738 704 Pfam ABC transporter 503 655 IPR003439 GO:0005524
Spst1g03738 704 Gene3D - 1 131 IPR027417 -
Spst1g03738 704 Pfam ABC-2 type transporter 47 150 IPR043926 GO:0140359
Spst1g03738 704 SMART AAA_5 512 703 IPR003593 GO:0016887
Spst1g03738 704 Pfam Plant PDR ABC transporter associated 357 420 IPR013581 -
Spst1g03738 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 102 IPR027417 -
Spst1g03738 704 CDD ABCG_PDR_domain2 472 697 IPR034003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03738 Spst-Chr1 47247922 47251664 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03738 K08711 - gmx:100791601 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03738 1 47247922 47251664 Spst1g03738 1 47247922 47251664 ECH