Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03681 ATGGCGTCGCCACCTTCTCCTTCCGCTTCTCAGTTCCTCCTCCTCCTCCTCCTCTTCGTCCTCGCTCTCTACACCGCGACGCCTTCCGCCCTCACCTGCACCACGCAGAAGCTCACCGACTCTGCCAACAACCTCTACGCCAACTGCCTGGACCTCCCCGTGTTGGATTCCTTCCTCCACTGGACCCACGACCGCGCCAACTCCTCCCTCTCGGTGGCCTTCCTGGCGACGCCGCCGAGCCCCGGGGGGTGGGTCTCCTGGGGGATCAACCCCACGGGGATCGGCATGGTGGGGGCGCAGGTGCTGGCGGGGTTCAAGGGCGGCGAAGGCGGCGCAGTCACCGTGAAAACGTTTGACTTGAAGTCATACGGGGTCATTAATCCCGGGAAGCTGTCGTTCGAGGTGTGGGACATGAAGGGCGAAGAGGTCGGAGGGATGATTAGGATCTTGGCGAAGGTTAAGGTTCCGGTGAAGGGGGAGAGTGTCAACCACGTATGGCAGGTGGGACCCTCAGTCACCGGTGGGATGATCGCCAGGCATGACTTCAAACCCGCCAATTTGAATTCCAAGGGAACTCTTAGCTTCAGTGGGGAACAGAGTAATGTTGCCCCTGCGGTCGACCCCGTCACAGTAAAGAAAAATATTCATGGAATTCTAAATGGTGTGAGTTGGGGTGTGCTGTTTCCCCTTGGAGTGATGATAGGAAGGTATCTGAGGACTTTTCCATCTGCAGATCCAGCTTGGTTCTATCTTCATGTTGGTTGCCAGGTCTCTGCTTATGCCATTGGCGTTGCGGGATGGGGAACAGGTATGAAACTGGGAAGCGAATCAGAGGGGATTCAATACAGTGTGCATCGCAATATCGGAATTACCCTCTTTTGCTTTGCCACCCTACAGGTTTTCGCATTGTTCCTGAGGCCAGGGAAGAGTCACAAGTACAGGTACATATGGAACATGTATCACCATGGCATTGGGTACAGTGTGGTTATCTTGGGAATCATCAACGTATTCAGGGGCTTCAGCATCTTGCATCCTGAAGAGAAATGGAAAACAACTTACACTGCAGTGCTTATTGCACTGGGGGTAGTTGCCTTATTCTTGGAAGTTATCACTTGGATTGTTGTGTTGAAGAGAAAGTCTGAGAAGTCCCCCAAAACTTATGATGGATACACTGGACAACCAACTACAGACCAACCCCTTCAGTAA 1206 0.5357 MASPPSPSASQFLLLLLLFVLALYTATPSALTCTTQKLTDSANNLYANCLDLPVLDSFLHWTHDRANSSLSVAFLATPPSPGGWVSWGINPTGIGMVGAQVLAGFKGGEGGAVTVKTFDLKSYGVINPGKLSFEVWDMKGEEVGGMIRILAKVKVPVKGESVNHVWQVGPSVTGGMIARHDFKPANLNSKGTLSFSGEQSNVAPAVDPVTVKKNIHGILNGVSWGVLFPLGVMIGRYLRTFPSADPAWFYLHVGCQVSAYAIGVAGWGTGMKLGSESEGIQYSVHRNIGITLFCFATLQVFALFLRPGKSHKYRYIWNMYHHGIGYSVVILGIINVFRGFSILHPEEKWKTTYTAVLIALGVVALFLEVITWIVVLKRKSEKSPKTYDGYTGQPTTDQPLQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03681 401 Pfam Eukaryotic cytochrome b561 216 340 IPR006593 -
Spst1g03681 401 ProSiteProfiles DOMON domain profile. 55 169 IPR005018 -
Spst1g03681 401 ProSiteProfiles Cytochrome b561 domain profile. 176 376 IPR006593 -
Spst1g03681 401 Pfam Protein of unknown function (DUF568) 96 195 IPR045265 -
Spst1g03681 401 FunFam Cytochrome b561 and DOMON domain-containing protein 195 384 - -
Spst1g03681 401 Gene3D - 190 385 - -
Spst1g03681 401 PIRSF UCP037471 6 399 IPR017214 -
Spst1g03681 401 CDD DOMON_CIL1_like 46 197 IPR045265 -
Spst1g03681 401 CDD Cyt_b561_FRRS1_like 188 369 - -
Spst1g03681 401 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 12 383 - -
Spst1g03681 401 SMART 561_7 215 340 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03681 Spst-Chr1 46529863 46531937 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03681 - - gmx:100776506 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03681 1 46529863 46531937 Spst4g01586 4 55190258 55190998 PCT