Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03674 ATGGATCTGGAGGGAATGGCTAAAATCTCCATGCTGTTGGTGGGGCTTTGGCTACTACTTAACTGGGCAGGGTTGTCGAGTGTAGAGCGCATGAAGTACAAGGACCCTAAACAGGCAATCGATGCTCGGGTTGAGGATCTTGTTAGCAGGATGACTCTTGAGGAGAAAATTGGTCAAATGTTGCAAGTTGAGAGGAAGCATGCATCTGCAGATTTGGTTAAGAAGTATTTTATTGGCAGTGTAATGAGTGAGGGAGGGAGTATTCCGGCTCCACAGGCTTCTGCTGAAACCTGGGTTGATATGGTGAATGAATTTCAGAAGGGTGCTTTGTCAACCCGGCTTGGAATTCCAATATTTTATGGGATTGATGCTGTTCATGGCCACAACACTGTTCACAATGCAACTATTTTTCCTCATAATATTGGCCTTGGAGCTACTAGGGACCCTGAACTAGTTAAGAGAATTGGAGCTGCAACTGCCCTTGAAGTTAGAGCGACAGGAATTCAATATGCTTATGCTCCTTGTATAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGTGAAGATACTGAATTTGTTCAAGCTATGACCGGAATCATATCAGGATTGCAAGGGGACATCCCTGATAATTTACCAAAGGGTGTCCCTTATATCTCTGGAAAAGAAAAAGTTATAGGCTGTGCTAAGCACTATGTGGGTGACGGTGGAACAATCAATGGGATTAATGAGCACAATACTGTTATAGATAGAGATGGATTGATGAAAATTCACATGCCAGCCTACTTGAACTCAATCAACAAAGGTGTGGCAACCATTATGGTTTCTTACTCCAGTTGGAATGGTGTAAAAATGCATGCTCACCATGATCTTATTACTGGCTACCTCAAGAATACTCTCCATTTCAAGGGCTTTGTCATTTCAGATTTTGAGGGTGTTGATAGGATCACGTCTCCACATCGTGCAAACATCACTTATTCAATTGAAGCAGGAGTTTCTGCTGGCATTGACATGTTCATGTTTCCAAAGCTTTACACAGAATTCATAGATGATCTAACCATGTTGGTGCAAAATAAGCATATTCCCATGAGTCGAATTGATGATGCGGTGAGAAGAATTTTGTGGGTTAAGTTCATGATGGGCATTTTTGAGAACCCTTTTGCTGATTACAGTTTGACCAAATATTTGGGAATCCAGGAGCACAGAAATTTGGCTAGGGAAGCTGTAAGGAAATCAATGGTCCTTCTGAAAAATGGTGAATCTGTTGATAAGCCTTCATTGCCTCTTCCTAAGAAGGTGCCAAAAGTACTAGTGGCTGGAACCCATGCAGATAATCTAGGATATCAGTGTGGTGGGTGGACCATACAATGGCAAGGAGTCAGTGGAAACAATCTTCTCAAAGGGACTACAATTCTCACTGCTGTGAAAAACACGGTTGATCCTGAAACCACAGTGATCTACAAGGAGAACCCTGATGTAGAATTTGTTAAATCCAATGAGTTTTCCTATGCCATAGTTGTAGTAGGAGAGTATCCTTATGCTGAAACGCACGGTGACAACATGAACTTGACAATCCCAGACCCTGGTCCCGAGACCATAACAAACGTTTGTGGAGTAATAAAATGTGTGGTTATCATAATTTCTGGTCGTCCCGTAGTGATTAAACCGTACCTTGGTATCATAGATGCACTTGTTGCTGCATGGCTTCCAGGTAGCGAAGGCCAAGGTGTGGCTGATGTTTTGTATGGTGACTACGGTTTCACAGGAAAGCTTCCAAGAACATGGTTCAAATCTGTTGATCAACTGCCAATGAATGTTGGAGATCCTTACTATGATCCCCTCTTCCCATTTGGGTTTGGCCTTTCTACCGAAACTACTAAGGTCTTTTACTCTGCCTAG 1911 0.427 MDLEGMAKISMLLVGLWLLLNWAGLSSVERMKYKDPKQAIDARVEDLVSRMTLEEKIGQMLQVERKHASADLVKKYFIGSVMSEGGSIPAPQASAETWVDMVNEFQKGALSTRLGIPIFYGIDAVHGHNTVHNATIFPHNIGLGATRDPELVKRIGAATALEVRATGIQYAYAPCIAVCRDPRWGRCYESYSEDTEFVQAMTGIISGLQGDIPDNLPKGVPYISGKEKVIGCAKHYVGDGGTINGINEHNTVIDRDGLMKIHMPAYLNSINKGVATIMVSYSSWNGVKMHAHHDLITGYLKNTLHFKGFVISDFEGVDRITSPHRANITYSIEAGVSAGIDMFMFPKLYTEFIDDLTMLVQNKHIPMSRIDDAVRRILWVKFMMGIFENPFADYSLTKYLGIQEHRNLAREAVRKSMVLLKNGESVDKPSLPLPKKVPKVLVAGTHADNLGYQCGGWTIQWQGVSGNNLLKGTTILTAVKNTVDPETTVIYKENPDVEFVKSNEFSYAIVVVGEYPYAETHGDNMNLTIPDPGPETITNVCGVIKCVVIIISGRPVVIKPYLGIIDALVAAWLPGSEGQGVADVLYGDYGFTGKLPRTWFKSVDQLPMNVGDPYYDPLFPFGFGLSTETTKVFYSA 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03674 636 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 417 626 IPR036881 GO:0004553|GO:0005975
Spst1g03674 636 PRINTS Glycosyl hydrolase family 3 signature 113 129 IPR001764 GO:0004553|GO:0005975
Spst1g03674 636 PRINTS Glycosyl hydrolase family 3 signature 137 156 IPR001764 GO:0004553|GO:0005975
Spst1g03674 636 PRINTS Glycosyl hydrolase family 3 signature 183 199 IPR001764 GO:0004553|GO:0005975
Spst1g03674 636 PRINTS Glycosyl hydrolase family 3 signature 299 317 IPR001764 GO:0004553|GO:0005975
Spst1g03674 636 PRINTS Glycosyl hydrolase family 3 signature 229 245 IPR001764 GO:0004553|GO:0005975
Spst1g03674 636 Pfam Glycosyl hydrolase family 3 N terminal domain 52 378 IPR001764 GO:0004553|GO:0005975
Spst1g03674 636 FunFam Glycosyl hydrolase family protein 402 628 - -
Spst1g03674 636 Pfam Glycosyl hydrolase family 3 C-terminal domain 417 626 IPR002772 GO:0004553|GO:0005975
Spst1g03674 636 SUPERFAMILY (Trans)glycosidases 31 416 IPR017853 -
Spst1g03674 636 Gene3D - 402 629 IPR036881 GO:0004553|GO:0005975
Spst1g03674 636 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 26 401 - -
Spst1g03674 636 Gene3D - 26 401 IPR036962 GO:0004553|GO:0005975
Spst1g03674 636 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 29 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03674 Spst-Chr1 46485034 46488337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03674 7 632 Glycoside Hydrolase AT5G20950 68.262 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03674 K05349 - gmx:100816705 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03674 1 46485034 46488337 Spst1g03674 1 46485034 46488337 ECH