Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03673 ATGGCTAAAATCTCCATGTTGTTGGTGGGGGTTTGGCTACTAGGTAGCTGGACAGGATTGTTGGATGCAGAATACATGAAGTACAAGGACCCTAAACAGTCAATTGATACTCGGGTTGAGGATCTTGTTAGCCGAATGACCCTTGAGGAGAAAATTGGCCAAATGTTGCAAATTGAACGCAAGTATGCATCTGCTGATTTGGTTAAGAAGTATTTTATTGGGAGTGTAATGAGTGAGGGAGGGAGTATTCCAGCTCCACAGGCTTCTGCTGAAACCTGGATTAACATGGTGAATGAATTTCAGAAGGGTGCTTTATCAACCCGGCTTGGAATTCCACTGTTTTATGGGATTGATGCTGTTCATGGCCACAACACAATTTACAAAGCAACTATTTTTCCGCACAATATTGGTCTTGGAGCTACCAGGGACCCTGAATTAATCAAGAGGATTGGAGCTGCAACTGCCCTTGAAGTTAGAGCAACAGGAATTCAATATGTTTATGCACCTTGTATAGCAGTATGTAGGGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGTGAAGATCCTAAATTAGTTCAAGCTATGACTGAAATCATACCAGGCTTGCAGGGGGACGTCCCTGAAATCTTACCTAAGGGTGTCCCTTTTATCAGTGGAAAAGAAAAAGTTCTAGCTTGTGCTAAGCACTACGTGGGTGATGGTGGAACAATCAAAGGGATTGATGAGTACGACACTGTTATAGACAGAGATGTACTGATGAGAATTCACATGCCAGCTTACTTCAACTCAATCAGCAAGGGTGTGGCAACTATTATGGTCTCTTACTCCAGTTGGAATGGAGTAAAAATGCATGCTAACCACGAACTCATTACTGGCTTCCTCAAGAATACTCTACATTTCAAGGGCTTTGTTATTTCAGACTTTGAAGGTATTGATAGGATCACCTCTCCACCTCATTCAAACTTCACTTATTCAGTTGAAGCAGGGGTTTCTGCTGGCATTGACATGTTCATGAATCCAAAGCTGTACATAGAATTCATCGATGATCTAACCATGTTGGTGAAAAATAAGTTCATTCCTATGAGTAGAATTGATGATGCAGTAAGTAGAATTTTGTGGGTTAAGCTCATGATGGGTATTTTTGAAAACCCTTTTGCTGATTACAGTTTGACCAGATATTTGGGAATCCAGGAGCATAGACAATTGGCCAGGGAAGCTGTAAGGAAATCAATGGTCCTTCTGAAAAATGGTCAATATGCTGACAACCCTTTATTGCCTCTTCCTAAAAAGGTGTCAAAAATACTTGTGGCTGGAAGCCATGCTGATAATCTAGGATATCAGTGTGGTGGCTGGACCATAGAATGGCAAGGAGTCAGTGGGAACAATCTTCTCAGAGGGACTACAATTCTCACTGCTGTGAAAAACACTGTTGATCCTGAAACCAAAGTGGTCTATAAGGAGAACCCTGATGCAGAATTTGTTAAATCCAATGGATTTTCCTATGCCATTGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGCATGGTGACAACATGAACCTGACAATCCCAGAGTTTGGTCCCGAGACCATAACAAATGTCTGTGGAGCAACAAAATGTGTGGTTATCATAATTTCTGGTCGTCCAGTAGTTATTGAACCATACGTTAGTATAATAGATGCGCTTGTTGCTGCATGGCTTCCAGGTAGCGAAGGCCAAGGTGTGGCTGATGTTTTATATGGTGACTACGGTTTCACAGGAAAGCTTCCAAGGACATGGTTCAAATCCGTTGATCAACTGCCAATGAATGTTGGAGATCCTCATTATGACCCCCTCTTCCCATTTGAGTTTGGCCTTTCTACCAAACCTACTAAGGCTTTTTACCCCGCTTAG 1896 0.4214 MAKISMLLVGVWLLGSWTGLLDAEYMKYKDPKQSIDTRVEDLVSRMTLEEKIGQMLQIERKYASADLVKKYFIGSVMSEGGSIPAPQASAETWINMVNEFQKGALSTRLGIPLFYGIDAVHGHNTIYKATIFPHNIGLGATRDPELIKRIGAATALEVRATGIQYVYAPCIAVCRDPRWGRCYESYSEDPKLVQAMTEIIPGLQGDVPEILPKGVPFISGKEKVLACAKHYVGDGGTIKGIDEYDTVIDRDVLMRIHMPAYFNSISKGVATIMVSYSSWNGVKMHANHELITGFLKNTLHFKGFVISDFEGIDRITSPPHSNFTYSVEAGVSAGIDMFMNPKLYIEFIDDLTMLVKNKFIPMSRIDDAVSRILWVKLMMGIFENPFADYSLTRYLGIQEHRQLAREAVRKSMVLLKNGQYADNPLLPLPKKVSKILVAGSHADNLGYQCGGWTIEWQGVSGNNLLRGTTILTAVKNTVDPETKVVYKENPDAEFVKSNGFSYAIVVVGEHPYAEMHGDNMNLTIPEFGPETITNVCGATKCVVIIISGRPVVIEPYVSIIDALVAAWLPGSEGQGVADVLYGDYGFTGKLPRTWFKSVDQLPMNVGDPHYDPLFPFEFGLSTKPTKAFYPA 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03673 631 FunFam Glycosyl hydrolase family protein 397 623 - -
Spst1g03673 631 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 21 396 - -
Spst1g03673 631 Pfam Glycosyl hydrolase family 3 C-terminal domain 412 621 IPR002772 GO:0004553|GO:0005975
Spst1g03673 631 PRINTS Glycosyl hydrolase family 3 signature 224 240 IPR001764 GO:0004553|GO:0005975
Spst1g03673 631 PRINTS Glycosyl hydrolase family 3 signature 294 312 IPR001764 GO:0004553|GO:0005975
Spst1g03673 631 PRINTS Glycosyl hydrolase family 3 signature 108 124 IPR001764 GO:0004553|GO:0005975
Spst1g03673 631 PRINTS Glycosyl hydrolase family 3 signature 132 151 IPR001764 GO:0004553|GO:0005975
Spst1g03673 631 PRINTS Glycosyl hydrolase family 3 signature 178 194 IPR001764 GO:0004553|GO:0005975
Spst1g03673 631 Gene3D - 21 396 IPR036962 GO:0004553|GO:0005975
Spst1g03673 631 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 412 621 IPR036881 GO:0004553|GO:0005975
Spst1g03673 631 Gene3D - 397 623 IPR036881 GO:0004553|GO:0005975
Spst1g03673 631 SUPERFAMILY (Trans)glycosidases 25 411 IPR017853 -
Spst1g03673 631 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 23 626 - -
Spst1g03673 631 Pfam Glycosyl hydrolase family 3 N terminal domain 47 373 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03673 Spst-Chr1 46478875 46482726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03673 1 626 Glycoside Hydrolase AT5G20950 69.489 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03673 K05349 - gmx:100779642 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03673 1 46478875 46482726 Spst1g03673 1 46478875 46482726 ECH