Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03668 ATGGAAATTCCCAAGCATGCACATGCCAATAGGTCTTATGAAGATTTTGATCCTTTGTTTATGTGGCGCAGAGAAGAGGGTCGTGACACCCTTGAACTTCATCTTCCAGGTTTTAAGAAAGACCAAATACGAATTCATATAAACCATGTTGGTTTACTGGTGATAAGTGGGGAGCGTCCTTTGGAAGGAAACAGATGGAAACGGTTCAAGAAGGAGTTCGAAATCCCATCATATTGCAACGACGATGCAATTCATGGCAACATGATGGAGAGCATTCTTTCGGTGGTGATGCCAAAGAAAAGCCCTGTGATTCTTCAAGAGGAGCAAGAAATGAAGCAAGAGAAAAGGGCTGACAGAAAAGGAGAGAGTGAAATATCAGAAGAAGATCACATTGCAGGTCATGCAGCAGAGTACAAGTTTGAAGAACATGATGTGAGGTTACCAGTGGAAACGACCAGAGATGTTGCCCTCAAATTCATGCTGGTTATGCTTCTCATATTGGTTGTAGCAAGTTACATATCAGACGTAAGCAAAAGCCTCATGGCTCAAGCTGCTTCGTATTTTCACAACTAG 573 0.4241 MEIPKHAHANRSYEDFDPLFMWRREEGRDTLELHLPGFKKDQIRIHINHVGLLVISGERPLEGNRWKRFKKEFEIPSYCNDDAIHGNMMESILSVVMPKKSPVILQEEQEMKQEKRADRKGESEISEEDHIAGHAAEYKFEEHDVRLPVETTRDVALKFMLVMLLILVVASYISDVSKSLMAQAASYFHN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03668 190 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 11 114 IPR002068 -
Spst1g03668 190 CDD ACD_sHsps-like 30 99 - -
Spst1g03668 190 Pfam Hsp20/alpha crystallin family 24 107 IPR002068 -
Spst1g03668 190 SUPERFAMILY HSP20-like chaperones 12 102 IPR008978 -
Spst1g03668 190 Gene3D - 1 105 IPR008978 -
Spst1g03668 190 PANTHER HEAT SHOCK PROTEIN 26 11 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03668 Spst-Chr1 46383070 46383980 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03668 - - pvu:PHAVU_001G113500g 308.531