Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03667 ATGGCAACTGATTTTGTCGTGGGTGATGACAAGGGTTGGACTCTTGATTTCAACTACACAGCGTGGGCAGAGGGCAAAGTTTTCCGCGTCGGCGACAACCTTCTGTTCAACTACGACAAAGCCAGCCACAACGTGCTGAAAGTGAACGGAACACAGTTCCAGGGGTGCAATTTCACGGCGGATAACGACTTACTCTCCAGCGGAAAGGACAGCATCACGCTGAAAGCCGAAGGGAGGAAGTGGTACATTTGCGGCAAAGGCAACCACTGCGCCAACCATCAAATGAAGCTCGTCATCAATGTCGAAGCTGCGGCTCCCACATCCGCACCCGCACCCACTTCTTCTGCTCCTTCTCGCATCGCTTCACTCTCTGGGGCACTCATTGTTGCCATAGCAGCCATCTTTGGCTGA 411 0.5328 MATDFVVGDDKGWTLDFNYTAWAEGKVFRVGDNLLFNYDKASHNVLKVNGTQFQGCNFTADNDLLSSGKDSITLKAEGRKWYICGKGNHCANHQMKLVINVEAAAPTSAPAPTSSAPSRIASLSGALIVAIAAIFG 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03667 136 FunFam Cupredoxin superfamily protein 1 106 - -
Spst1g03667 136 Pfam Plastocyanin-like domain 13 92 IPR003245 GO:0009055
Spst1g03667 136 SUPERFAMILY Cupredoxins 1 101 IPR008972 -
Spst1g03667 136 PANTHER BLUE COPPER PROTEIN 3 106 IPR039391 GO:0009055
Spst1g03667 136 Gene3D - 1 106 IPR008972 -
Spst1g03667 136 CDD Phytocyanin 3 101 - -
Spst1g03667 136 ProSiteProfiles Phytocyanin domain profile. 3 103 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03667 Spst-Chr1 46382056 46382576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03667 1 123 Miscellaneous Gene Families AT2G32300 36.585 5.17e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03667 - - vum:124834848 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03667 1 46382056 46382576 Spst1g03667 1 46382056 46382576 ECH