Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03666 ATGGCGAAGAAGGCAAGGCGAGCATCTCAGATCTTACTTGATTATGCAATCGAAGTCGTTCTTCGCCGTTCTCCGTCCGCCCCGGCGCCATACACCCGCTGCGCCACCACGCTTCTACACAACCTTTTCTCAACTTCACTTCCGAAGCAAACCATGGATAAACAAACCGCAGAAAAATCACGTCGGGAGCGAAGGAAAGAATCCCGCTTGGCAAAAAATGTATCAAAACACCAATCCTGGCTCCTCCACCAGAAATCTCGAGCTATGAAAAACCATGGCAATCATTCAGAGATGGAAACTAAAAGCAAATCCGAAACATCAGTTAGTTCTAGTATCAATGAAACACAAGCTGAGAAGTTACAGTCTTACTCTTGGAAACATGAGATAGATGAAGAGTACATAGAGTCAGAGGAAGAACAAGATGGTTCTGTTGCAAAGAAAAAGAAGAAAATGAAGAAGGCTCCTAGTAAAAGTTCCAGGAAGAGCATGTTGGAGATGGGCATGCAGCATGTTTCTATAGCTGCTGAAAAGGACCTAGAACTGGAAAGGAAGCTTTCCAAAAAGCTTAAGGTGAAGGAAGGAAAATTGAGGGGAATGGATGATGGGCTTAACATATTACTTGGAGGAATGTCGTCTTCTTTTGATTTCATGGGAGAGGGGGAGGTTCATGGTATTGGTGAATTGCCTGTGACGAGATGGAAGAAGAGCTCGTCAAGTGAGAAGGACAAGTTGTCAAAGAAAAGATTGAAAGCGGAAGCAATGGATGATATATCAGGGCATGTAGAAACTTCTGATGAAGATGTAGAATCGGATGATGTTCCTGACAGTATGCCTTCAAGGAAGAAGCATAAGAAAAGGAAATTGTCAGGTCAACAGCAGGGAAACAATGTGGGGGATGATGCTGTTGGCATGTCCAAGCCTGTGGAATCTTGTGGAATGGAGGGAAAATTGGGGGATGCTCCTGCTGAAGTTTCAGATAAGAGAGCCAAAGAAAAATATATAGCGCCTCACTTGAGGGCTCGTGCTGGCAGTGAACCTGAAGAGCATACTCAAATTCGAAGACGTGTGCGAGGTCTTCTTAACAGGCTTTCTGAATCTAATGTTGAGTCAGTAACTGGGGAATTGTCCCTTATCTTTCAGTCTGTTCCTCGTAGTGTTGCTTCACAGATCTTGACCGAGGAAGTTTTGGCATCATGTTCTGGTGGTCCCCGTGGCAATCAACAGTATGCTGCTGTTTTTGCTGCATTTGTTGCTGGGATGGCATGTTTGGTTGGTGTTGACTTCAGTGCAAAGTTTATGGCTTCCTTTGCTAAATGCTTTGAGGACGAGTACAATAAAGAAGATAATCTCTCCTTGCGGAATCTTACTCTTCTCTTATCCTATTTATGCATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTCTGGTTATGCTGAGCAAGCGTTTAGCTGAGACAGATGTCTCTATCATTTTGGCATTGTTACAAAGTTGTGGGATGAAAATAAGGGCTGATGATCCAGCTGCCATGAAAGATTTCATTCTTAGCGTTCAGAATACATCAAATAAGTTGAAGGCTTCATCTGGAGATGACGGTCAAAAGAAAACTAGTAAAAGAATGGACTTCATGCTTGAAATCATATGTGACATCAAGAATAACAAAAGAAAGCCAAATGAGGACTCTGCTCATCACACTCGGATTAAGAAGTGGTTACAGAAGTTAAGAGTTGATGACATTTTGATTAGAGGGCTTAAATGGAGCAAGTTACTTGATCCTGACAAGAAGGGCCAGTGGTGGCTGTCTGGAGATGCGGCTACTTCAACAGGTAATGTTGAAGAAGTTGCCAACAGAATAGACAAAGATGTTCTTGAAACCCAAAAAATGCTTCAGCTCGCTGCTGCTCAAAAGATGAACACAGATGCCAGAAGAGCAATCTTTTGTATAATAATGAGTGGGGAGGATTACATGGATGCATTCGCAAAGCTTCTAAGATTGGAATTACCAGGCAAGCAGGATAGGGATATCATGCGTGTTCTTGTGGAGTGTTGCGTGCAAGAGAAAGTTTTTAACAAGTATTATACAGTGCTGGCTTCCAAGTTATGTGAACATGACAAAAATCACAAGTTCACTCTACAGTTTTGTCTGTGGGACCAGCTTAAGGAGCTGGAGTCAATGCCACTTATGAGATCAATGCACTTGGCCAAATTTGTGGCTGAAATGGTTGCCTCTTTCACTCTCTCCCTTACTGTCTTGAAGACTGTGGATCTGAATGATATCACCTTGTTGACACCAAGAAGGATCATGCATTTCCGCATTCTGTTTGAAGCCATTTTGGAGTATCCTGAAAACTTGGTATGGAACATATTCACACGTGCAGCAGTGACCCCTGAACTTGAAAGTCTTAGACAAGGCCTTGAGTTTTTCATGAAGGAGTACGTTGTGAAAACCAATAAAGACCTAACGCAAAAGTTTAAGTTAGCAAAAAAGGCCCTTAATAACGTGGAAGGAATTTTGATGTGA 2523 0.4233 MAKKARRASQILLDYAIEVVLRRSPSAPAPYTRCATTLLHNLFSTSLPKQTMDKQTAEKSRRERRKESRLAKNVSKHQSWLLHQKSRAMKNHGNHSEMETKSKSETSVSSSINETQAEKLQSYSWKHEIDEEYIESEEEQDGSVAKKKKKMKKAPSKSSRKSMLEMGMQHVSIAAEKDLELERKLSKKLKVKEGKLRGMDDGLNILLGGMSSSFDFMGEGEVHGIGELPVTRWKKSSSSEKDKLSKKRLKAEAMDDISGHVETSDEDVESDDVPDSMPSRKKHKKRKLSGQQQGNNVGDDAVGMSKPVESCGMEGKLGDAPAEVSDKRAKEKYIAPHLRARAGSEPEEHTQIRRRVRGLLNRLSESNVESVTGELSLIFQSVPRSVASQILTEEVLASCSGGPRGNQQYAAVFAAFVAGMACLVGVDFSAKFMASFAKCFEDEYNKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLVMLSKRLAETDVSIILALLQSCGMKIRADDPAAMKDFILSVQNTSNKLKASSGDDGQKKTSKRMDFMLEIICDIKNNKRKPNEDSAHHTRIKKWLQKLRVDDILIRGLKWSKLLDPDKKGQWWLSGDAATSTGNVEEVANRIDKDVLETQKMLQLAAAQKMNTDARRAIFCIIMSGEDYMDAFAKLLRLELPGKQDRDIMRVLVECCVQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDQLKELESMPLMRSMHLAKFVAEMVASFTLSLTVLKTVDLNDITLLTPRRIMHFRILFEAILEYPENLVWNIFTRAAVTPELESLRQGLEFFMKEYVVKTNKDLTQKFKLAKKALNNVEGILM 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03666 840 SMART ma3_7 642 748 IPR003891 -
Spst1g03666 840 FunFam MIF4G domain-containing protein / MA3 domain-containing protein 320 601 - -
Spst1g03666 840 MobiDBLite consensus disorder prediction 233 303 - -
Spst1g03666 840 Pfam MA3 domain 643 744 IPR003891 -
Spst1g03666 840 Pfam MIF4G domain 354 555 IPR003890 GO:0003723|GO:0005515
Spst1g03666 840 MobiDBLite consensus disorder prediction 54 73 - -
Spst1g03666 840 MobiDBLite consensus disorder prediction 103 120 - -
Spst1g03666 840 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 62 835 - -
Spst1g03666 840 SMART if4_15 353 555 IPR003890 GO:0003723|GO:0005515
Spst1g03666 840 Gene3D - 320 598 - -
Spst1g03666 840 MobiDBLite consensus disorder prediction 134 164 - -
Spst1g03666 840 SUPERFAMILY ARM repeat 345 557 IPR016024 -
Spst1g03666 840 MobiDBLite consensus disorder prediction 234 264 - -
Spst1g03666 840 MobiDBLite consensus disorder prediction 46 121 - -
Spst1g03666 840 ProSiteProfiles MI domain profile. 641 757 IPR003891 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03666 K17583 - gmx:100780608 1249.96