Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03645 ATGAAGGTGGTGGCGCTTGTTAGCGGTGGCAAAGACAGTTGCTATGCCATGATGAAGGCTATTCACTATGGTCACGAGATTGTTGCATTGGCCAATTTGATGCCGCTTGATGATTCTGTGGACGAGCTCGATAGTTACATGTATCAAACTGTTGGGCATCAAATTATTGTCAGGTATGCTGAATGCATGGGATTGCCATTGTTCAGGAGGCGAATACAAGGATCCTCAAGGCATCAGGAGCTTGGTTACAAAGCAACTCAAGGTGATGAAGTCGAAGATCTTTTCATTTTGTTACGTGAAGTGAAAAGGAAGATTCCCTCAGTCACTGCAGTGTCTTCTGGAGCCATTGCATCTGACTATCAGAGATTGCGGGTGGAAAGTGTTTGTTCAAGGTTAGGCCTTGTTTCTCTGGCATACTTATGGAAACAAGATCAGTCATTGCTTCTTCAGGAAATGATTACGAAAGGAATTGTAGCTATAACAGTGAAGGTAGCTGCCATGGGTTTGGATCCTGCAAAGCACTTGGGTAAAGAATTAGCCTTCTTAAATGCTTATTTACATAAATTGAAAGAATTATATGGAATCAACGTTTGTGGAGAAGGAGGGGAATATGAAACATTAACTCTTGATTGCCCTCTCTTTTCTAATGCTCGCATTGTGCTCGATGAATATCAAGTTGTGATGCACTCTTCAGATTCCATAGCTCCTGTTGGAATCCTTCATCCCTTGGCATTTCATTTGGAAAATAAAGCAGATGCTCAGTATTTAAAATCACATGACAAAATACATGAGATTTGTACACAGAAACTGGGATCTGTGTATGAAGTGCATGACAGTCTAGAAGGATGTGAAGCCATGTTCAAGCCTGTGGATTATAGAGCTGACGCAATTGATGGCATAGAACATAAATTTAACATCTCAAGAACAAATAACAAGGGAACATTCTCCCTATGTTTCTGGTTGCAAGATTCATGCAATGGTTTGCAGGAAGACTTGAATATTGTTTTGGGGAAAATTGAATCACAATTATTGGGCCTTGGTTTTGGCTGGGAGAATGTCCTCTATATTCACCTTTACATTGATGACATGAATAAGTTCTCTGAGGCAAATGAGACATATATAAAGTTTATTAGACAAGAGAAATGTCCATTTGGCGTCCCATCTCGTAGTACTGTTGAAATGCCTCTTATAGAATTGGGTTTCAGCAGCGCATACATAGAAGTTCTGGTAGCAAACAATAAAGATAAGAAGGTTTTGCATGTGCAGAGTATTTCCTGTTGGGCACCTAGTTGCATTGGGCCATACAGTCAGGCAACCTTGCATGAGGGTATACTTCACATGGCTGGTCAATTAGGGCTTGACCCTCCTACAATGAATCTTTGCCAGGGAGGCCCTGGTGTTGAACTAGAACAAGCACTAAAAAACAGTGAAGCAGTGGCAAAATGCTATAATTGTTCAATATCGACATCTGCAATTGTTTTTGTTATTTATTGTTCTAAACGTATTTCACCATTAGAAAGACTCAGTATTCAGGAGAAACAAGAAACAATCCTTAGGCAGATGAAGACCTCCCATTTGCAGGAAGTAAACAGTTACAAAGTGTTGGTTCCCTTGTTCCTTTATGTTCTTGTTCCTGATCTACCTAAAAGAGCATGTGTAGAAGTAAAGCCTATTCTTTATGTTGAGGATGGAACAGATACAGCATCTGAGGTCATAACCAAAAGTTCTAGATCAGAGACACCATCACATGATTGGGGTTTCAAGCCTGAGAATTGGCATGATTCTTGCATTCAGAAATGTGTGGTTTCTGGGAAGATTTGTGCCATTATACTGTATATAACTAGTGAGCTGGCTACGAAGATTTGTATCGACTCTCAGCCTGATGATTATGTGAAAAATGGTCAATATTCTCTTCCTAAGGAACATATGGAGAAGATATCGAAGTTCTGCATTTATCTTCTTGAGAAAGTTATGACTGATAATGACTTTGCCTGGGAAGATATAATGAGTTTGAGGTTCTACATCCCGGAAAGCCTTCAAATGCCAGTGCAGCTATTACAACCTATGTTCTGCAATGCGCTTTCTGAACTATCGGAAATGTGTCAGAAGAAATTTCAAAATGGTGAGGAGCCAATCTTCAACATAGTTCCTGTCATGGGTGCTGGGAGATCTGCCTCATCCATGGACGATATAGTAACCTGTGAATTATTGGCTCGGAAATCCTGA 2226 0.4025 MKVVALVSGGKDSCYAMMKAIHYGHEIVALANLMPLDDSVDELDSYMYQTVGHQIIVRYAECMGLPLFRRRIQGSSRHQELGYKATQGDEVEDLFILLREVKRKIPSVTAVSSGAIASDYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITKGIVAITVKVAAMGLDPAKHLGKELAFLNAYLHKLKELYGINVCGEGGEYETLTLDCPLFSNARIVLDEYQVVMHSSDSIAPVGILHPLAFHLENKADAQYLKSHDKIHEICTQKLGSVYEVHDSLEGCEAMFKPVDYRADAIDGIEHKFNISRTNNKGTFSLCFWLQDSCNGLQEDLNIVLGKIESQLLGLGFGWENVLYIHLYIDDMNKFSEANETYIKFIRQEKCPFGVPSRSTVEMPLIELGFSSAYIEVLVANNKDKKVLHVQSISCWAPSCIGPYSQATLHEGILHMAGQLGLDPPTMNLCQGGPGVELEQALKNSEAVAKCYNCSISTSAIVFVIYCSKRISPLERLSIQEKQETILRQMKTSHLQEVNSYKVLVPLFLYVLVPDLPKRACVEVKPILYVEDGTDTASEVITKSSRSETPSHDWGFKPENWHDSCIQKCVVSGKICAIILYITSELATKICIDSQPDDYVKNGQYSLPKEHMEKISKFCIYLLEKVMTDNDFAWEDIMSLRFYIPESLQMPVQLLQPMFCNALSELSEMCQKKFQNGEEPIFNIVPVMGAGRSASSMDDIVTCELLARKS 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03645 741 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 1 738 IPR030662 -
Spst1g03645 741 Pfam Endoribonuclease L-PSP 428 495 IPR006175 -
Spst1g03645 741 Gene3D - 309 410 IPR035959 -
Spst1g03645 741 FunFam Endoribonuclease 412 560 - -
Spst1g03645 741 Pfam Diphthamide synthase 1 230 IPR002761 -
Spst1g03645 741 Gene3D - 411 561 IPR035959 -
Spst1g03645 741 CDD eu_AANH_C_2 435 559 - -
Spst1g03645 741 NCBIfam diphthine--ammonia ligase 1 231 IPR002761 -
Spst1g03645 741 FunFam Endoribonuclease 293 411 - -
Spst1g03645 741 FunFam diphthine--ammonia ligase 1 158 - -
Spst1g03645 741 CDD Alpha_ANH_like_IV 2 214 IPR002761 -
Spst1g03645 741 FunFam Diphthine--ammonia ligase 159 255 - -
Spst1g03645 741 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 241 - -
Spst1g03645 741 Gene3D - 160 257 - -
Spst1g03645 741 SUPERFAMILY YjgF-like 417 564 IPR035959 -
Spst1g03645 741 SUPERFAMILY YjgF-like 326 398 IPR035959 -
Spst1g03645 741 Gene3D HUPs 1 157 IPR014729 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03645 K06927 - gmx:100807009 1325.84