Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03642 ATGGTGAAGCAACCATTCTCTTTAAAGTTCCCTCCTCTACTCTCTTTATCGTCATACCCTTCTGTTCAGTCACAGAATCTTGACGTCCGTAGTGGATCTCTTCATGCTATCAGCGATGTGCACAAAATAGTTTGTTCTAGTTCTTGGAGATTATTGTGTAGCAAGAGTAGTAATATTACAGAACCAAAGGAGGGCCATGAGGTGAGGGCTCAGGTCACAGTGAGAAGGAAAAAGCTAGCAGTTTTCGTGTCTGGTGGAGGATCCAACTTCAGATCAATTCATGATGCCTCCAAAAGGGGATCACTTCATGGAGATGTTACTGTATTGGTCACAAATAAAAGTGAGTGTGGAGGTGCAGAGTATGCAAGAAATAATGGTATCCCCGTTATATTGTTCCCTAAAGCTAAAGATGAACCCAAAGGATTATCTCCAAGTGACCTTGTCGATACACTAAGGAAATTCGAGGTAGATTTTGTTCTTTTAGCTGGATACCTCAAACTGATACCAGTGGAATTGATCCGAGCTTATGAAAGATCTATTTTCAACATTCATCCATCACTTCTTCCAGCTTTTGGAGGCAAGGGCTACTATGGCATGAAGGTGCATAAAGCAGTAATTGCTTCTGGAGCAAGGTTTTCAGGTCCTACCATTCATTTTGTTGACGAACACTATGACACAGGGCGTATCCTTGCACAGCGAGTGGTCCCTGTGCTTGCCCATGATACTGCAGAGGAGTTGGCTGCAAGGGTTCTCAATGAGGAGCACCAATTATATGTTGAGGTGGTGGAGGCTTTATGTGAAGATCGTGTCGTTTGGAGGGAAGATGGTGTTCCTCTCATTCAAAGCAGAGAAAATCCCAATGACTTTCGCTGA 873 0.4341 MVKQPFSLKFPPLLSLSSYPSVQSQNLDVRSGSLHAISDVHKIVCSSSWRLLCSKSSNITEPKEGHEVRAQVTVRRKKLAVFVSGGGSNFRSIHDASKRGSLHGDVTVLVTNKSECGGAEYARNNGIPVILFPKAKDEPKGLSPSDLVDTLRKFEVDFVLLAGYLKLIPVELIRAYERSIFNIHPSLLPAFGGKGYYGMKVHKAVIASGARFSGPTIHFVDEHYDTGRILAQRVVPVLAHDTAEELAARVLNEEHQLYVEVVEALCEDRVVWREDGVPLIQSRENPNDFR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03642 290 PANTHER PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE 76 287 - -
Spst1g03642 290 Hamap Phosphoribosylglycinamide formyltransferase [purN]. 78 268 IPR004607 GO:0004644|GO:0006189
Spst1g03642 290 Pfam Formyl transferase 77 262 IPR002376 GO:0009058
Spst1g03642 290 NCBIfam phosphoribosylglycinamide formyltransferase 77 270 IPR004607 GO:0004644|GO:0006189
Spst1g03642 290 CDD FMT_core_GART 78 265 IPR004607 GO:0004644|GO:0006189
Spst1g03642 290 Gene3D - 57 288 - -
Spst1g03642 290 SUPERFAMILY Formyltransferase 77 278 IPR036477 GO:0009058
Spst1g03642 290 FunFam phosphoribosylglycinamide formyltransferase, chloroplastic 62 288 - -
Spst1g03642 290 ProSitePatterns Phosphoribosylglycinamide formyltransferase active site. 214 237 IPR001555 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03642 K00601 - gmx:548052 456.447