Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03639 ATGTATCTACCTCGCCACATCCTCACCAGATTATCCCCGCACCGCCGCTACTTTTCCCACTCCGCCGCCGCCATTCTCCACCCGCCGGAGCCAGAGCCGCTCACATACCTCGAAGGTTTTCCTCGCCCGGATCCCAAACACGACGAGACAATCCTCGCCGTCATCCGCGCGGACTCCGGCACGAACATTTCGGCGAAGGAGCGACGCGTTGGGCGCGTGCCGAGCATCGTCTTCGAGCAGGAGGACGGCCAGCACGGCGGCAACAAACGCCTCATCTCCGTCCGCACCGATCAGATCAGAAAACTCGTTAATCACCTCGGTAAATCTTTCTTCCTCTCTCGTCTCTTCCACCTCGAAGTCCGCACGCAGTTCGACTCCGACGACGTCGTTGAGAGAATTCGCGTCTTGCCTCGCCAGATTCATTTGAAAGCTGGTACAGACGCGCCGTTGAATGTGACCTTTATTAGGGCTCCTTCGCACGCTTTGTTGAAAGTTGATGTTCCTCTTGTCTACAGAGGTGATGATGTATCTCCTGGACTCAAGAAAGGTGCTGCTTTGAACACCATCAAAAGGACGGTTAAGTTCTTATGCCCTGCTGACATTATTCCCCCATATATTGACGTGGATTTAAGTGAGTTGGATGTGGGCCAGAAGTTGGTAATGGGAGACCTCAAAGTTCACCCAGCTTTAAAACTTCTTCAGTCAAAAGATGAAGCTGTTTGTAAAATTATGGGCCAAAGAGTTTCTGAAATACAAAGGAAATCTAAATAA 771 0.5149 MYLPRHILTRLSPHRRYFSHSAAAILHPPEPEPLTYLEGFPRPDPKHDETILAVIRADSGTNISAKERRVGRVPSIVFEQEDGQHGGNKRLISVRTDQIRKLVNHLGKSFFLSRLFHLEVRTQFDSDDVVERIRVLPRQIHLKAGTDAPLNVTFIRAPSHALLKVDVPLVYRGDDVSPGLKKGAALNTIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEAVCKIMGQRVSEIQRKSK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03639 256 Pfam Ribosomal protein TL5, C-terminal domain 163 245 IPR020057 -
Spst1g03639 256 Gene3D Ribosomal protein L25, beta domain 161 252 IPR037121 -
Spst1g03639 256 SUPERFAMILY Ribosomal protein L25-like 56 245 IPR011035 GO:0006412
Spst1g03639 256 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 28 250 - -
Spst1g03639 256 Gene3D Ribosomal Protein L25; Chain P 50 157 IPR020056 -
Spst1g03639 256 FunFam 50S ribosomal protein L25 162 252 - -
Spst1g03639 256 Pfam Ribosomal L25p family 55 154 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03639 Spst-Chr1 45965757 45968321 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03639 K02897 - gmx:100809143 451.055