Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03625 ATGGGGCTCAAAATCTTCATGGCTTCCTTCATTCTAACCCCAATTTTGTTCTTTGTTATCTTCATTCCCACAAGATTGACCACACAAATCTCCAGCCTCAGGCCTACTGTGAACTACTTGAGTGTCCCAAAGAACAGCAAGGCCTATCCAGTTACTTTTGCCTACTTGATCTCTGCATCCAAAGGAGATGTTGGGAAGCTCAAAAGGTTGATAAGGGTGCTGTATCATCCAGGGAACTACTATCTGATTCATGTGGATTATGGGGCTCCTGAGGCTGAACATAGGGAAGTGGCAGAATATGTGGCTAGTGATCCTGTTATTGGTCAAGTGGGGAATGTTTGGGTTGTGGGGAAGCCTAATTTGGTCACATATAGAGGACCAACCATGCTTGCTACCACTCTCCATGCCATGGCAATGCTTCTCAGGACCTGCCAATGGGATTGGTTTATTAATCTTAGTGCGTCTGATTATCCCTTAGTTACACAAGATGATCTGATCCAAGTGTTTTCTGAGTTGCCAAGGGATATCAATTTCATACAGCATAACAGTCAATTGGGTTGGAAACTGAATAAGAGAGGGAAGCCAATAATCATAGATCCGGGGCTTTATAGTCTGAATAAATCAGAAATTTGGTGGGTCATTAAGCAGAGGAGTCTCCCACAATCTTTTAAGCTCTACACAGGTTCAGCTTGGACAATACTATCAAGATCTTTTGCAGAATATTGCATAGTGGGATGGGAAAACTTGCCAAGGACCCTCCTCCTGTACTACACCAACTTTGTGTCATCCCCCGAAGGATATTTCCAAACGGTTATATGCAACTCTGAAGACTACAGGAACACCACTGTTAACCATGATCTTCACTACATTACTTGGGACAACCCTCCAAAACAACACCCTAGGTCTCTAGGGCTCAAGGATTACAGAAAAATGGTTCTTAGTAGCCGTCCATTTGCCAGAAAATTCAAGAGAAATGATGCAGTCCTTGATAAAATTGATAGAGAACTTCTGAAGAGGTATCATGGTCAATTTTCCTATGGAGGGTGGTGCTCTGAGGGTGGAAAGCACAGAGCATGTCCAGGTCTGAGAACTGAGAATTATGGTGTTCTTAACCCTGGTCCAGCCTCAAGAAGGCTAAAAAATCTGCTAATAAAACTTCTGTCCGATAAATTTTTTCGTAAACAACAGTGCAGGTAA 1197 0.4286 MGLKIFMASFILTPILFFVIFIPTRLTTQISSLRPTVNYLSVPKNSKAYPVTFAYLISASKGDVGKLKRLIRVLYHPGNYYLIHVDYGAPEAEHREVAEYVASDPVIGQVGNVWVVGKPNLVTYRGPTMLATTLHAMAMLLRTCQWDWFINLSASDYPLVTQDDLIQVFSELPRDINFIQHNSQLGWKLNKRGKPIIIDPGLYSLNKSEIWWVIKQRSLPQSFKLYTGSAWTILSRSFAEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVICNSEDYRNTTVNHDLHYITWDNPPKQHPRSLGLKDYRKMVLSSRPFARKFKRNDAVLDKIDRELLKRYHGQFSYGGWCSEGGKHRACPGLRTENYGVLNPGPASRRLKNLLIKLLSDKFFRKQQCR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03625 398 PANTHER GLYCOSYLTRANSFERASE 19 397 IPR044610 GO:0015020
Spst1g03625 398 Pfam Core-2/I-Branching enzyme 53 311 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03625 Spst-Chr1 45746641 45750001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03625 16 398 Glycosyltransferase AT4G27480 53.385 2.54e-150 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03625 - - gmx:100818137 744.962