Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03609 ATGGCCTCAAAGCTGGTTTTGCAAAGAACGCTCTTCAGGTTTTTGCAACTGTTATCTCCTACTTCTTCCATTCATGCAGTCCCGTTCCTTTCTGTAAAAGCTTCAGAATTCACATCCCTCTATAGGAAGAATAGCCTTCTTCCTCCTCTCTCATCTTCTTCTAGAAGCTTGTGCTCTCGCAATTTTAATCTTGATGAATCTCAAGGCCCCCTGACTATGGATTACCGTTCTTTACTGGAGGAGGGTGAATTCCACAGACTGGCTGATTCCACAATTCATACAGTACAAGAGAAATTAGAGGACTATGGAGACATGGTTGAAGTTGATGGGTTTGACATAGACTATGGGAATGATGTTTTGACTATAAAACTTGGGGATCTTGGCACCTATGTATTGAACAAACAAACACCAAATCGACAACTTTGGCTGTCTTCACCACTGAGTGGTCCGTCAAGGTTTGATTGGGATCGTGATACAGAAGCTTGGATTTATAGACGGAACAAAGCAAACTTGAATAAAATTTTGGAAGGTGAGTTGGAGGAGTTATGTGGCAAACCTATAGTTCTTTCTTAA 573 0.4119 MASKLVLQRTLFRFLQLLSPTSSIHAVPFLSVKASEFTSLYRKNSLLPPLSSSSRSLCSRNFNLDESQGPLTMDYRSLLEEGEFHRLADSTIHTVQEKLEDYGDMVEVDGFDIDYGNDVLTIKLGDLGTYVLNKQTPNRQLWLSSPLSGPSRFDWDRDTEAWIYRRNKANLNKILEGELEELCGKPIVLS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03609 190 PANTHER FRATAXIN 42 189 IPR002908 GO:0008199|GO:0016226
Spst1g03609 190 NCBIfam iron donor protein CyaY 81 188 IPR002908 GO:0008199|GO:0016226
Spst1g03609 190 FunFam Frataxin, mitochondrial 72 190 - -
Spst1g03609 190 PRINTS Frataxin signature 132 147 IPR002908 GO:0008199|GO:0016226
Spst1g03609 190 PRINTS Frataxin signature 79 97 IPR002908 GO:0008199|GO:0016226
Spst1g03609 190 PRINTS Frataxin signature 117 132 IPR002908 GO:0008199|GO:0016226
Spst1g03609 190 Pfam Frataxin-like domain 80 186 IPR002908 GO:0008199|GO:0016226
Spst1g03609 190 NCBIfam frataxin 83 180 IPR017789 GO:0004322|GO:0005739|GO:0006879|GO:0018283
Spst1g03609 190 ProSiteProfiles Frataxin family profile. 79 187 IPR002908 GO:0008199|GO:0016226
Spst1g03609 190 CDD Frataxin 79 187 - -
Spst1g03609 190 ProSitePatterns Frataxin family signature. 131 145 IPR020895 -
Spst1g03609 190 SMART Frataxin_Cyay_2 79 190 IPR002908 GO:0008199|GO:0016226
Spst1g03609 190 Gene3D Frataxin/CyaY 71 190 IPR036524 GO:0008199|GO:0016226
Spst1g03609 190 SUPERFAMILY Frataxin/Nqo15-like 69 187 IPR036524 GO:0008199|GO:0016226
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03609 Spst-Chr1 45497537 45500894 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03609 K19054 - gmx:100815916 304.293