Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03607 ATGTCTATAAATGAAAAACAGAATCTGGTTCCACCTCAACCTCATCTCTTTGGTTCTCCATCCAGGTTCATGTCTCTAGCAGTTTCTTCACCAAAATGGTTGAACAATTGTGTTCAAGCACTCATCTCAATTCTATGTTGCGTCGTTTTCCTCATGTTTGATCTTCTTGATTCTGTTTTTTGTGTTATCTATGGATATCTTGATAAACTCATTGAAGGGCAGGCTTCCCCTTGTTGCTGCTCTATCTGGGAGAGGCAAAAGAGGAGGATGAATGTGACAGATGATGGTCTATCAGATAGCTTGTTTGAGAGAAAGAACACTTTCAGAGAAATGGGATTCTTTCAATATGAGAGAAAACGCGAAGATTCCAATACAAATTTTAATAAAGATGGTGGAATGTCAGTGAACAGTTGGTCTGATTGTGGCTGTGAGTCTTGTCTTTCATGGGTGAATGATGGAAGCGACTTTAAACTTCATTTTGTTGTAAAGGAACCCTTGTTGGCCACTGGTGAGAACTTCCGAGGAAAACCTTCTGAGAATGTCATATTCTTGCATGGATTTCTCTGTTCTTCCTCATTTTGGACACAGACAGTGTTTCCATATTTTTCTGAAAAGGTGAATCACAAGTACAGATTGATTGCCATTGACCTGTTGGGATTTGGCAAGAGTCCAAAGCCTAGAGATTGCTCATACACTTTGAAGGATCACGTAGAAATGATTGAGAAATCTGTGGTTCAACCTTTGGAGTTGAGTAGCTTTCATTTAGTTGCACACTCCATGGGTTGCATAATTGCATTGGCCTTGGCTGCTAAGTACCCCAAGTGTGTCAAATCAATCACCCTTGTTGCTCCCCCATACACTTCTTCTGACGAAAATGATGCTTGTCTAAAGACACTATCAATGCTTGCTGGAAAGAAATTGTGGTCCCCATTGTCGTTTGGTACTTCTTTTATGTCATGGTATGAGCACTTGGGTCGTACTGTTTGCCTCGTCTATTGCAGAAATCACAGAATATGGGAGAGCATTCTAAAATGCATTACTCGCAAGAGGGATCTTCATTTCTTGACAATAGACTTGGCCAGGCACACCCATCATTCAGGTTGGAGTTCCATGCATAATGTGCTATGTGGAGGAGCAAAATTTGTGGACAGTTACCTTATAATTTTGACCAAAGTTGGAGTGCGCATAAGTGTGATTCAAGGTGATAAAGATCGAGTTGTCCCAATGGAGTGTTGTAGTAAGTTAAAGTTGAAGGCTCCTAATGCTGAAATCAATATCATTCCAAATGCAGACCATGGCACTGTACTATTTGGCAGAGAGAAGGAATTTGCATCTAGTCTAGAGCATATATGGGAATCTTGCTTTTGA 1368 0.405 MSINEKQNLVPPQPHLFGSPSRFMSLAVSSPKWLNNCVQALISILCCVVFLMFDLLDSVFCVIYGYLDKLIEGQASPCCCSIWERQKRRMNVTDDGLSDSLFERKNTFREMGFFQYERKREDSNTNFNKDGGMSVNSWSDCGCESCLSWVNDGSDFKLHFVVKEPLLATGENFRGKPSENVIFLHGFLCSSSFWTQTVFPYFSEKVNHKYRLIAIDLLGFGKSPKPRDCSYTLKDHVEMIEKSVVQPLELSSFHLVAHSMGCIIALALAAKYPKCVKSITLVAPPYTSSDENDACLKTLSMLAGKKLWSPLSFGTSFMSWYEHLGRTVCLVYCRNHRIWESILKCITRKRDLHFLTIDLARHTHHSGWSSMHNVLCGGAKFVDSYLIILTKVGVRISVIQGDKDRVVPMECCSKLKLKAPNAEINIIPNADHGTVLFGREKEFASSLEHIWESCF 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03607 455 Gene3D alpha/beta hydrolase 150 453 IPR029058 -
Spst1g03607 455 PRINTS Alpha/beta hydrolase fold signature 209 224 IPR000073 -
Spst1g03607 455 PRINTS Alpha/beta hydrolase fold signature 269 282 IPR000073 -
Spst1g03607 455 PRINTS Alpha/beta hydrolase fold signature 255 268 IPR000073 -
Spst1g03607 455 PANTHER HYDROLASE 152 445 - -
Spst1g03607 455 SUPERFAMILY alpha/beta-Hydrolases 175 436 IPR029058 -
Spst1g03607 455 Pfam alpha/beta hydrolase fold 181 289 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03607 Spst-Chr1 45484246 45486333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03607 28 454 Acyl Lipid Metabolism Gene Families AT5G17780 47.674 4.30e-141 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03607 - - ccaj:109802537 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03607 1 45484246 45486333 Spst1g03607 1 45484246 45486333 ECH