Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03597 ATGCATAAATGCCAACAAAAGAAAAAACTCTTTTACTCTACAGACGTTGGCGACCACCAGCTCAAGTTGTTGATTGGAGTCGAGGCTAAGGACGTGGCTCACGGTGGTTGCTCGGAGGACTCGCAGTGGCAACGATTTTGGTGGCTTGGTGGAGCTGATAGAGGAGGCGAAGATGGTTGCAAAATAAGAGCAACTAAGATTGGGGCACAATGGCTTGATCAGGTGGCTCGCTGCGTGAATTTAGGGTTTCGATTGGGTGAATTTGGTGGCTTTGTGGAGCTGATGGAGGCGCGGAGGAGGGCGATGGTGGTCGTGGGTCAGGCTGGTGGAGGTGTGGTGGTCGGTGGTTTAGGTCGCGAGGGGTTGAGTGAGTTGGGACTACACAACTTAAGTGGAGAGTTGAGGAAGAAAGGGTTGGGGTTGTCGTGGAGTAAGCACCATAGTAGAGTGGTGGAGATGGGAGAACAGCTAAAGGAGAAGCTTTTGCATCAGCCAAACAACAACTATTTGGAAGAAGAAGAAGAAGAGTCACTGTGGAAAAGGGTAAGGGAAGAAAGCAAGAAGATATGGGTGGTAGCAGGCCCAGCCATACTCTCAAGGGTTTCGACCTTTGGGATTCTGGTGATTGGTCAATCCTTCGTTGGCTATATTGGCTCAACTGAACTTGCTGCTTTTGCCCTTGTTGTGACTGTCCTAGTCAGGTTTGCAAATGGGGTATTGGTTGGCATGGCAAGTGCGTTGGGAACTCTTTGTGGTCAAGCATATGGGGCCAGAAAGTATAACATGCTTGGAGTGTATCTTCAAAGATCATGGATAGTGTTGTTCATAGCCTCAATACTCCTTCTTCCTATTTTCATCTTCACCACTCCATTGTTAGAGGCTCTAGGCCAAGACAAAACCATTGCTCAAGTTGCCGGAAACATTTCTCTCTGGGCAATTGGTATCATATTTTCTTTCGCAGTTACATTCACCTGCCAAATGTTCCTGCAATCACAGAGCAAGAACAAGATCCTTGTCTACCTTGCAGCAGTTTCAATTCCAGTCTACGTTTTTCTGTCATGGCTTTTATCTGTTCAGTTCAATTTTGGTCTCAACGGTGCACTGACATCAATACTTTTGGCAAATTGGATTCCAATCATTGGCCAGCTTGTGTTTATCATGACCAAGTGCCCTGACACATGGAAAGGTTTCTCATTCTTGGCCTTCAAAGATCTATGGTCTGTTATCAAGCTTTCCCTCTCTTCTGGAGTTATGTTATGTCTTGAGATCTGGTACAACACAGTTCCGATTCTTCTTACCGGTAACACGGAAAATGCAGAAGTGTCCATTGATGCTCTGTCCATATGCCTCAACATCAGTGGATGGATAATGATGGTAGCCCTTGGTTTCTTTGCTGCTGCAAGTGTCCGGGTTGCAAACGAGCTTGGAAGAGGGAGTTCAAAGGCTGCAAAGTTTTCCAGTCTGATAACAGTTCTCACATCATTTGGCATTGGATTCGTGCTGTTCTTCGTGTTCCTTTTTCTGAGGGAAAGACTTGCTTACGTTTTCACTGCAGACTCTGCGGTGGTTAAAGAAGTTGGTGATTTATCACCATTGCTCTCATTTTCCATCTTGTTGAACAGTGTCCAACCTGTGCTATGTGGAGTTTCTGTGGGAGCTGGGTGGCAAAGCATTGTAGCATATGTAAACATTGGCTGTTATTATGTGATTGGTGTTCCTGTTGGAGTGTTGCTTGGTAATCTTCTCCATTTGGAAGTCAAGGGTATTTGGATTGGAATGGTGTTTGGAACACTTCTTCAAACCCTAATTCTTATTACGATCACATTGAAAACAGATTGGGAGAAACAGGTAGAGCTAGCTCGAAATCGTGTTAACAAATGGACAGTGGTGGACAACGAAGAGTCACACGAAAGACCAAGTATATCTAGCTAA 1932 0.4534 MHKCQQKKKLFYSTDVGDHQLKLLIGVEAKDVAHGGCSEDSQWQRFWWLGGADRGGEDGCKIRATKIGAQWLDQVARCVNLGFRLGEFGGFVELMEARRRAMVVVGQAGGGVVVGGLGREGLSELGLHNLSGELRKKGLGLSWSKHHSRVVEMGEQLKEKLLHQPNNNYLEEEEEESLWKRVREESKKIWVVAGPAILSRVSTFGILVIGQSFVGYIGSTELAAFALVVTVLVRFANGVLVGMASALGTLCGQAYGARKYNMLGVYLQRSWIVLFIASILLLPIFIFTTPLLEALGQDKTIAQVAGNISLWAIGIIFSFAVTFTCQMFLQSQSKNKILVYLAAVSIPVYVFLSWLLSVQFNFGLNGALTSILLANWIPIIGQLVFIMTKCPDTWKGFSFLAFKDLWSVIKLSLSSGVMLCLEIWYNTVPILLTGNTENAEVSIDALSICLNISGWIMMVALGFFAAASVRVANELGRGSSKAAKFSSLITVLTSFGIGFVLFFVFLFLRERLAYVFTADSAVVKEVGDLSPLLSFSILLNSVQPVLCGVSVGAGWQSIVAYVNIGCYYVIGVPVGVLLGNLLHLEVKGIWIGMVFGTLLQTLILITITLKTDWEKQVELARNRVNKWTVVDNEESHERPSISS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03597 643 CDD MATE_eukaryotic 185 618 IPR045069 GO:0042910|GO:1990961
Spst1g03597 643 NCBIfam MATE family efflux transporter 195 590 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst1g03597 643 PANTHER MULTIDRUG RESISTANCE PROTEIN 178 613 - -
Spst1g03597 643 Pfam MatE 195 355 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst1g03597 643 Pfam MatE 417 576 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03597 Spst-Chr1 45339397 45347308 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03597 K03327 - gmx:100775619 732.25