Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03593 ATGGAGGGGAACCTAAAGCAGAAATTGCTGAGAGAGATAACCTCAGAGGAAGAAAAAGAAGAGGAATCATCGTTGGTGAAGAGGGTGTGGAAAGAGAGCAAGTTGATGTGGATAGTGGCAGCACCAGCCATATTCACAAGGTTCTCCACGTTTGGTCTCAATGTTATAAGTCAAGCTTTTGTTGGTCATATTGGCCCAAGGGAACTTGCTGCTTTTGCTCTTGTCTTCACTGTTCTCCTACGCTTCGCCAATGGTGTTCTGTTAGGAATGGCGAGTGCATTGTCAACGCTTTGTGGACAAGCATTTGGAGCAAAAGAATATAACATGATGGGAGTTTATCTTCAAAGATCATGGATAGTTTTGTTCTTGACAGCACTTTGTCTTGTTCCGGTGTTCATCTTCACAAGCCCCATTTTAACGCTTTTAGGCCAAGATGAGAGCATAGCAGATGTGGCAGGAACCATTTCTCTCTGGTCAATTCCTATCATGTTTTCTTTCATCTTCTCGTTCACTTGCCAGACATTCCTGCAATCACAGAGCAAGAACGTCATCATTGCATTCGTGGCAGCTTTTGCGATAGTGATTCATGTGTTTCTCTCCTGGCTTTTGACAATGTATTTCAGCCTTGGGATTGCTGGTGCAATGATTTCAGCAATTTTGGCATTCTGGATCCCCAACATTGGTCAAATCATATTTGTCACATGTGGTTGGTGCTCTGAAACATGGAAAGGTTTCTCCTTTTTGGCATTCAAAGACCTCTGGCCTGTTATCAAGATGTCCCTTTCAGCTGGTGCAATGTTATGTCTTGAGCTATGGTACAACACAATATTGGTTCTTTTAACGGGTAACATGGAAAATGCAGAGGTCCAAATTGATGCTCTATCTATATGCATCAACGTCAACGGATGGGAAATGATGATAGCACTTGGTTTCATGGCTGCTTCAAGTGTTCGAGTGGCAAACGAGCTTGGAAAAGGAAGCTCCAAAGCTGCAAAGTTCTCTATACTTGTGACAGTGCTTACATCATTTTCAATTGGGTTTCTCTTGTTTATACTTTTCTTACTCTTAAGAGAAAAAATAGCCTATGTATTTACTACAAGCGAAGACGTGGTTAATGCTGTTGGGGATTTGTCACCTTTGTTGGCAATTTCTCTGTTACTAAATAGTGTTCAACCAGTGCTCTCAGGGGTTGCTATTGGAGCAGGGTGGCAGAGCATTGTAGCATATGTGAACATAGGGTGTTACTATGTCATAGGTATTCCTGTTGGAATAGTACTTGGTAATGTTTTCCACTTGCAAGTTAAGGGTGTTTGGATTGGAATGTTGTTTGGAACACTAGTTCAAACTATAGTCCTTATTATAATCACATACAGAACTAATTGGGATGAACAGGTAATGATAGCCCGTAGCCGTATTAATAGGTGGTCTAAAGTGGATCCTGATCATGAAACAATTAGATCAGATCATTAG 1470 0.4136 MEGNLKQKLLREITSEEEKEEESSLVKRVWKESKLMWIVAAPAIFTRFSTFGLNVISQAFVGHIGPRELAAFALVFTVLLRFANGVLLGMASALSTLCGQAFGAKEYNMMGVYLQRSWIVLFLTALCLVPVFIFTSPILTLLGQDESIADVAGTISLWSIPIMFSFIFSFTCQTFLQSQSKNVIIAFVAAFAIVIHVFLSWLLTMYFSLGIAGAMISAILAFWIPNIGQIIFVTCGWCSETWKGFSFLAFKDLWPVIKMSLSAGAMLCLELWYNTILVLLTGNMENAEVQIDALSICINVNGWEMMIALGFMAASSVRVANELGKGSSKAAKFSILVTVLTSFSIGFLLFILFLLLREKIAYVFTTSEDVVNAVGDLSPLLAISLLLNSVQPVLSGVAIGAGWQSIVAYVNIGCYYVIGIPVGIVLGNVFHLQVKGVWIGMLFGTLVQTIVLIIITYRTNWDEQVMIARSRINRWSKVDPDHETIRSDH 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03593 489 CDD MATE_eukaryotic 32 465 IPR045069 GO:0042910|GO:1990961
Spst1g03593 489 NCBIfam MATE family efflux transporter 42 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst1g03593 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 461 - -
Spst1g03593 489 Pfam MatE 265 424 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst1g03593 489 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03593 Spst-Chr1 45230360 45233230 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03593 K03327 - gmx:100792122 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03593 1 45230360 45233230 Spst1g03593 1 45230360 45233230 ECH