Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03588 ATGAAGCAAAGGCTGAAGAAGCAATCATTGTCCAATTGGTGTATATCTCACCGGGAGAGAGCAAGAGAAATTGTTGAAACCTGGGATAAATTATTCAATGCTTCCCAGAAGGAGCGGCGTCTCTCTTTTCTATACTTGGCTAATGACATCTTGCAAAATAGTAAGCGAAATGGTAGTGAGTTTGTCAACGAATTCTGGAAAGTTCTTCCAGCAGCTCTAAGGCATGTTTATGAAAGTGGTGATGAATTAAGAAGGCTAGCAGTGGGAAGACTAAATGAGTACACTGAACTGAAAGGTATAGCTCAGAATGTTAAAACTGTTCAGTTGCTGCTGAGCATTGCTTTTGTCAATGGTGCTTGTTCAGTTTCATCTTACCTCATCCCTTTTGGGGATGCTTTGACAACCCTTCCCTTTTTCTTTGAACAGAATGCATTTGACTGCCCATTTCTTGTTAATGAAGAGAAATGA 468 0.4017 MKQRLKKQSLSNWCISHRERAREIVETWDKLFNASQKERRLSFLYLANDILQNSKRNGSEFVNEFWKVLPAALRHVYESGDELRRLAVGRLNEYTELKGIAQNVKTVQLLLSIAFVNGACSVSSYLIPFGDALTTLPFFFEQNAFDCPFLVNEEK 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03588 155 Gene3D - 3 109 IPR008942 -
Spst1g03588 155 Pfam CID domain 7 86 IPR006569 -
Spst1g03588 155 SMART 558neu5 1 114 IPR006569 -
Spst1g03588 155 CDD CID_RPRD_like 8 91 - -
Spst1g03588 155 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 8 90 - -
Spst1g03588 155 ProSiteProfiles CID domain profile. 1 117 IPR006569 -
Spst1g03588 155 SUPERFAMILY ENTH/VHS domain 8 91 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03588 Spst-Chr1 45151387 45153718 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03588 K15559 - gmx:100800067 150.984