Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03576 ATGGAGGGGCAGAAGAAGAGGGTGGCTGTTCTGGTGGGTTGCAATTATCCCAACACTAGCAATGAGTTGCATGGTTGCATAAACGATGTTTTGGCCATGAAGGAGACTTTGGTGAAGCGATTTGGGTTTGAAGACAGTAACATTGAGGTGCTCACTGATGCCCCAGACTCTTGTAAAATGCCCACTGGTGCCAACATCAAGCAGGCACTGGCTAAGATGGTTGATGAAGCTGAAGCAGGTGATGTGCTATATTTTCACTACAGTGGACATGGAACTAGAATCCCTTCCAAGAAACATGGCCACCCCTTCCGCCATGAGGAGGCTATTGTGCCTTGTGACTTCAATCTCATCACTGATTTGGACTTCCGGCAACTAGTAAACAAGCTACCAAAGGGTGTAAGCTTCACAATCCTTTCAGACTCATGCCACAGTGGAGGCCTCATAGACAAAGAGAAAGAGCAAATAGGTCCATCCTCATCGCTTCAAAAAGGTGCCACATCAAAAACAAGTTATACCCTCACCCCAAAGACAATCCCTTATCACTCCATATTGCAGCACCTCTCTTCCCTTACAAAAGCCACCACGGAAGACATGGGCATGCACATGCTAGAACTCTTCGGCTCGGATGCGAGTTTGAGGTTTCAAACTGCGTCGCATGGTCAGTTGGAGGCGCTGGGACCCGACGAGGGCATTCTGCTGAGCGGGTGCCAGGCGGACGAGACCTCGGCGGACATGAACCCCAGCGCGGGCGGCGGGAAGGCCTATGGGGCGTTCAGCAACGCGGTGGAGATGGTGGTGAGGGAGGATAAGGAGGGTGGGTTGAGCAACAAAGAGGTGGTAGTGAGGGCGAGGAAGTTGCTACAAGATCAGGGGTTTGAACAGCATCCATGCCTCTATTGCAGTGATCAGAATGCTGATGCTATCTTCTTGTTAACCTAA 939 0.5069 MEGQKKRVAVLVGCNYPNTSNELHGCINDVLAMKETLVKRFGFEDSNIEVLTDAPDSCKMPTGANIKQALAKMVDEAEAGDVLYFHYSGHGTRIPSKKHGHPFRHEEAIVPCDFNLITDLDFRQLVNKLPKGVSFTILSDSCHSGGLIDKEKEQIGPSSSLQKGATSKTSYTLTPKTIPYHSILQHLSSLTKATTEDMGMHMLELFGSDASLRFQTASHGQLEALGPDEGILLSGCQADETSADMNPSAGGGKAYGAFSNAVEMVVREDKEGGLSNKEVVVRARKLLQDQGFEQHPCLYCSDQNADAIFLLT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03576 312 PANTHER METACASPASE-4 4 305 - -
Spst1g03576 312 SUPERFAMILY Caspase-like 1 116 IPR029030 -
Spst1g03576 312 Gene3D - 1 311 - -
Spst1g03576 312 Pfam Caspase domain 6 306 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03576 Spst-Chr1 45012235 45013380 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03576 - - gmx:100781510 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03576 1 45012235 45013380 Spst1g03576 1 45012235 45013380 ECH