Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03574 ATGGCGTCCCAAATTATCCGTGAGTGGTCTGGAATCAATACATTCGCTCCTGCTACCCAGACTAAGTTGCTTGAACTGTTGGGAAAACTTAAGCAAGAGAATGTGAACTCCTTGACTATACTTGTGATGGGAAAAGGTGGTGTTGGAAAATCTTCAACTGTCAACTCCATCATTGGGGAAAGGGTGGTTTCGATCAGTCCTTTCCAGTCGGAAGGGCCAAGACCTGTGATGGTGTCACGATCAAGGGCTGGTTTTACATTGAACATTATTGACACTCCTGGTCTCATTGAAGGGGGATACATCAATGATATGGCACTTGATATAATAAAACGTTTCCTTCTGAACAAGACCATAGATGTGCTGCTTTACGTGGATCGCTTGGATGTGTATAGAGTGGACAACTTGGATAAATTAGTTGCCAAAGCTATAACAGATAGTTTTGGCAAAGGAATATGGAACAAGGCTATAGTAGCACTCACACATGCCCAGTTCTCTCCACCAGATGGCTTGCCTTATGATGAATTCTTCTCTCAAAGATCTGAGGCTCTCTTGAAGGTTCTTAAGTCAGGCGCTAGGTTAAAGAAAGAAGCCTTTCAGGCTGCTTCTATTCCTGTTGTTTTGGTTGAGAACAGTGGGAGATGCAACAAGAATGATAGCGATGAAAAGGTTCTTCCAAATGGGACTGCATGGATTCCCCATCTAGTCCAAACAATCACAGAAATTGCATTGAACAAAAGTGTGTCTATTCATGTTGACAAGAATTTGATTGAAGGGCCAAATCCGAATCAAAGAGGAAAATTATGGATTCCTCTCGTGTTTGCTCTCCAATATTTCCTTATTATGAAGCCAATAAAAGGACTGATCGAGAGGGACATTGCAAATGAGAGAAAGCCGGCATGGGAGAGACGTGATGCTGCATTTCGGAAGAGAGATTTTTATTAG 942 0.4225 MASQIIREWSGINTFAPATQTKLLELLGKLKQENVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALDIIKRFLLNKTIDVLLYVDRLDVYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSQRSEALLKVLKSGARLKKEAFQAASIPVVLVENSGRCNKNDSDEKVLPNGTAWIPHLVQTITEIALNKSVSIHVDKNLIEGPNPNQRGKLWIPLVFALQYFLIMKPIKGLIERDIANERKPAWERRDAAFRKRDFY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03574 313 FunFam Translocase of chloroplast 2 268 - -
Spst1g03574 313 Pfam AIG1 family 38 228 IPR006703 GO:0005525
Spst1g03574 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 257 IPR027417 -
Spst1g03574 313 Gene3D - 2 268 IPR027417 -
Spst1g03574 313 NCBIfam GTP-binding protein 1 309 IPR005688 GO:0006886|GO:0009707|GO:0015450
Spst1g03574 313 ProSiteProfiles AIG1-type G domain profile. 35 259 IPR006703 GO:0005525
Spst1g03574 313 CDD Toc34_like 7 252 - -
Spst1g03574 313 PIRSF Toc33/toc34 1 309 IPR005688 GO:0006886|GO:0009707|GO:0015450
Spst1g03574 313 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 37 210 IPR045058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03574 Spst-Chr1 45003279 45007160 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03574 - - gmx:100782594 585.489