Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03542 ATGAGATTGATCAAAATGGCTGTGACCATTGACACACATCATGGGTTTAAGCCATTTAGCCGATCCCAGAGATGCAAACTCCAATCCTACGGTCAACTTGATCCCAACATTCTTGAACTTAGCCAAACTGGTGGTACTCTTTCACGCTCTTTTGAACTAGCATTTCAAGCCGAAAATATTCACCGTAGTTTCTCCACTCCATGCCTCACCCTACCCACACTGCTAGGGGAAGACCTCACTTGTCACCCTCCAAGGATTGAGATTGTTAATGGAAGTGGAGCTCCAGTACATGCTCTAGTTGTTGAGGTTGCCATAGCTATGGCCTCAGGTGCCCATCCAATTCCCCTCCCGAGTGGCCTAGGTGGTGCCTATGTTTTCCGCAACCAAAATGGCATCAACATTGCTGTAGCAAAGCCAGTAGATGAAGAGCCTTTAGCCTTGAACAACCCAAAGGGCTTAGGGGGTCAAATGCCGGGCCAACCTGGCCTAAAGAAATCAATTCGCATTGGTGAAACTGGTATCAGGGAGTTAGCAGCTTATCTTCTTGATCATGGAGGCCTTGCGGCTGTTCCTCCTACAGCTTTAGTCAAATTCTCTCATGCTTCATTCTTTTTCACTTCTGATGAAGAAGCCACTGTTCCTTCTCACATGCCTAAAGTTGCCTCCCTACAGCGCTTTGTCGGTCACGGTTTTGATGCAGGAGAGTTGGGCCCTTCTTTCTTCTCAACTGCTTCAGTCCACCGTATTGGGATCCTAGACATTAGGATCATGAACCTTGATAGACATGCAGGGAATATGCTTGTGATGACGCATGACCATAATAATACTTGTTATGTTGGTAGGGTTACTGACCTTGTACCCATTGACCATGGCTTTTGCCTCCCTGAGTGGCTGGATGATCCATATTTTGAGTGGCTGCATTGGCCACAAGCCTCTGTTCCTTTCTCTGGCAATGAACTCGAGTACATCTCCAAACTTGATCCCTTTAAAGATGCAGAGATTTTAAGAACTAAAATTCCTTTGCTGAGGGAGTCCGCTATACGTGTTCTTATTGTTTGTACCATTTTGTTGAAGAAAGCTGCTGCTGCTGGCCTTTGTCTTGCTGAAATAGGCCAAATGATGACTAGAGAATTTTGTGGTGTTGAAGAGTTACCAAGTGAAATGGAAAACATTTGCTCAAAAATCAAGGCTAGCATCCCTCGTGGTTCCCACAGCGAGAACTGCAAAGAAGAAACTGAACAAGGGTCTAAATGTGAAGTTGGAGGCATTTCCTTCGGTGACCTGAACCAAGGTGACTGGGAAACGTTTTTGGAGGATTTTGTTGAGCTTTTGCATTGCGTTTTCGAGGACAAGAAGCGCAAAAACAAAAGATGGAACATCATGAAAGTTACTGAACTTTAG 1401 0.4518 MRLIKMAVTIDTHHGFKPFSRSQRCKLQSYGQLDPNILELSQTGGTLSRSFELAFQAENIHRSFSTPCLTLPTLLGEDLTCHPPRIEIVNGSGAPVHALVVEVAIAMASGAHPIPLPSGLGGAYVFRNQNGINIAVAKPVDEEPLALNNPKGLGGQMPGQPGLKKSIRIGETGIRELAAYLLDHGGLAAVPPTALVKFSHASFFFTSDEEATVPSHMPKVASLQRFVGHGFDAGELGPSFFSTASVHRIGILDIRIMNLDRHAGNMLVMTHDHNNTCYVGRVTDLVPIDHGFCLPEWLDDPYFEWLHWPQASVPFSGNELEYISKLDPFKDAEILRTKIPLLRESAIRVLIVCTILLKKAAAAGLCLAEIGQMMTREFCGVEELPSEMENICSKIKASIPRGSHSENCKEETEQGSKCEVGGISFGDLNQGDWETFLEDFVELLHCVFEDKKRKNKRWNIMKVTEL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03542 466 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 110 407 IPR000403 -
Spst1g03542 466 Pfam Phosphatidylinositol 3- and 4-kinase 127 370 IPR000403 -
Spst1g03542 466 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 57 456 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03542 Spst-Chr1 44624359 44625759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03542 6 425 Acyl Lipid Metabolism Gene Families AT2G40850 57.343 4.76e-153 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03542 - - gmx:100809677 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03542 1 44624359 44625759 Spst1g03542 1 44624359 44625759 ECH