Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03524 ATGGATTCGTCGTGTCTCTCCAACGATTCAGTTTCTGGATTCAAAGACAGGGAGTCAATGGTTGACCCCTTTTTGGTCGAGGCTCTCCAGAACCCTCGTCACCGCCTCACCATTTTGCGGATGGAGCTTGACATTCAGAGGTTTATGAATAATGCTGATCAACAGCATTTTGAGTTTCCACATTTCCCTTCTTCCTATCTCAGACTGGCTGCACATCGTGTTGCTCAACACTACAGCATGCAAACAATGGTTCAAGATAATGGCTTAGATGGTCAGGGAAGTAAAATTCTGGTGAGAAAGTTACCAGAAAGCAAGTATCCTGTGGTTAGGTTATCTGAAATACCTGCAAAGCAATTGGAAAATGATAAATCTGAGCAGAAAAAATTTGTTATTAGAACTAGGCCTAATAAGAACAGTTTGAACGACGCCAATGGAGTTGGGATGAAAGGAAATCCTCTAAGAAGCGTGGAAGAGAGGAAGGAAGAATATGACCGAGCACGAGCACGTATCTTTAGTGGCTCTAGAATCTCTGACTCAGGTGATACCTCATCCATGGTTCCAATGGATGGGAGAAATTCTTCTACTAGCAAGGATGAGAATGAAACTAGCAAGAACCCCATAGTTGATTCAGAAAGATGTATCAATGTCCGGGACAGTTGTTCAAATCGAGTTGCCATATTCAGGGATAGAGAAAAGGATCGTAGTGATCCAGATTATGACCGTAGTTACGGAAGATATGCTAGGAGTATTCCAACCTCTGCTGTTACCTTGGTGCCATTTAACTTGCAAAAGGCTCAACCTTCATTTGCTCAATATGATGCTACATTTAATCAATTGGGTCAAATGTCACAACCTCAGGCCACACTTGGATATATCCCTCCTTCTACCCCGATAATAAATCCTTTTTGCACTACAGGAGTGAATCAGACACCTAGGGACGGTGCTTACCTACAGTGGCCTAGTGCAGCTATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTTCCAGGCTCCATTTGGTCAACAGCCGTTGAGCTTTGACTATTCACAGAACTATTAG 1068 0.427 MDSSCLSNDSVSGFKDRESMVDPFLVEALQNPRHRLTILRMELDIQRFMNNADQQHFEFPHFPSSYLRLAAHRVAQHYSMQTMVQDNGLDGQGSKILVRKLPESKYPVVRLSEIPAKQLENDKSEQKKFVIRTRPNKNSLNDANGVGMKGNPLRSVEERKEEYDRARARIFSGSRISDSGDTSSMVPMDGRNSSTSKDENETSKNPIVDSERCINVRDSCSNRVAIFRDREKDRSDPDYDRSYGRYARSIPTSAVTLVPFNLQKAQPSFAQYDATFNQLGQMSQPQATLGYIPPSTPIINPFCTTGVNQTPRDGAYLQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSFDYSQNY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03524 355 Pfam R3H domain 37 88 IPR001374 GO:0003676
Spst1g03524 355 Pfam SUZ domain 125 174 IPR024771 -
Spst1g03524 355 Gene3D - 12 136 IPR036867 GO:0003676
Spst1g03524 355 SUPERFAMILY R3H domain 8 136 IPR036867 GO:0003676
Spst1g03524 355 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 18 342 - -
Spst1g03524 355 MobiDBLite consensus disorder prediction 175 193 - -
Spst1g03524 355 MobiDBLite consensus disorder prediction 136 157 - -
Spst1g03524 355 MobiDBLite consensus disorder prediction 174 207 - -
Spst1g03524 355 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Spst1g03524 355 SMART R3H_4 19 101 IPR001374 GO:0003676
Spst1g03524 355 CDD R3H_encore_like 34 100 - -
Spst1g03524 355 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03524 Spst-Chr1 44357348 44360022 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03524 - - gmx:100796710 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03524 1 44357348 44360022 Spst1g03524 1 44357348 44360022 ECH