Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03510 ATGTTTCCCCAGCCATGGACCTTCATACTCACAATCATTGCAACTTCACTGCTCATGTCCTCACTGGTTAAGTCATTTCCAGAAGCTGATAAGAGCATGTTCTCTGAGGTAGATTTCAATTTCCCTGTTGCTTCTGTAGGGCCTGGCTGTACATCCGTTGGAATTGGAGCTTTCACCGAACATGGTCCTTTTGTTACAAATCAAGGAGAGGCTATTGAGAAAAATCAGTACAGTTGGAACAAAGAGGCAAACATTTTGTACCTGGAGTCACCAGCAGGTGTTGGTTTCTCTTACTCTCTCAATTTGTCATTTTATAAAGCACTGGACGATGAGATAGGAAACCCTCTTTTGGATTTTGACACTGATATGAATGCAGTTGATGAATATTACTGGTCTCATGGAATTATAACTGATCATGCTTACAAAATCATGACCTCTCTATGTAACTCATCTAGACTATTAAGAGAATACATCAGAGGCCAACTTTCCAACGATTGTCTTCTTGCAGCTCGAAAAGTCTCAGAAGAATATTCGTTTACATCTTTCATTGACCCATATTATGTCATTGGCAACAGATGTCTTTCTTACAATGTATCTCAGGCAGGTTTTCTTAAGGAGATGCTAAGTTCAGAGATGTTTCAGTTTAGGAAATCCCATGATGTGCTTCAAACCCAAGAACCTGAGCAGCAACTTGATGAGTGTAATATGAAATATTCAGAGAAGTACTTGAACAGGAAAGATGTGCAGAAGGCTCTTCATGCCCGGCTGGTGGGAACTACCAATTATCGTTTATGCAGGAAGATTGTACTGGCAAATTATGACCCATTGAACAGGGAGATACCGACAATTAATGTTGTCGGGTTCCTTGTAAAATCAGGTCTTCGAGTCATCGTTTACAGTGGGGACCAAGACTCAGTGATTCCATTCATGGGCACGAGAAGATTGGTTGAAAGCCTAGCAAAGAAACTACGACTCAAAACAACCTTGCCTTACAGTGCCTGGTTTGTGGACAAACAGGTTGGAGGATGGTCACAAGTTTATGGGAATCACCTCATGTTTGCCACAATAAGAGGAGCTTCACATGGCACTCCAACTACCCAACCAAAGAGATCTTTTCTTTTGTTTGAGGCGTTTCTTCAAGGGAAACCACTCCCTAAAGCATAA 1164 0.4141 MFPQPWTFILTIIATSLLMSSLVKSFPEADKSMFSEVDFNFPVASVGPGCTSVGIGAFTEHGPFVTNQGEAIEKNQYSWNKEANILYLESPAGVGFSYSLNLSFYKALDDEIGNPLLDFDTDMNAVDEYYWSHGIITDHAYKIMTSLCNSSRLLREYIRGQLSNDCLLAARKVSEEYSFTSFIDPYYVIGNRCLSYNVSQAGFLKEMLSSEMFQFRKSHDVLQTQEPEQQLDECNMKYSEKYLNRKDVQKALHARLVGTTNYRLCRKIVLANYDPLNREIPTINVVGFLVKSGLRVIVYSGDQDSVIPFMGTRRLVESLAKKLRLKTTLPYSAWFVDKQVGGWSQVYGNHLMFATIRGASHGTPTTQPKRSFLLFEAFLQGKPLPKA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03510 387 Gene3D alpha/beta hydrolase 44 111 IPR029058 -
Spst1g03510 387 Gene3D alpha/beta hydrolase 112 385 IPR029058 -
Spst1g03510 387 SUPERFAMILY alpha/beta-Hydrolases 47 385 IPR029058 -
Spst1g03510 387 Pfam Serine carboxypeptidase 47 107 IPR001563 GO:0004185|GO:0006508
Spst1g03510 387 Pfam Serine carboxypeptidase 112 381 IPR001563 GO:0004185|GO:0006508
Spst1g03510 387 PRINTS Carboxypeptidase C serine protease (S10) family signature 75 87 IPR001563 GO:0004185|GO:0006508
Spst1g03510 387 PRINTS Carboxypeptidase C serine protease (S10) family signature 351 364 IPR001563 GO:0004185|GO:0006508
Spst1g03510 387 PRINTS Carboxypeptidase C serine protease (S10) family signature 88 98 IPR001563 GO:0004185|GO:0006508
Spst1g03510 387 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 112 368 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03510 Spst-Chr1 44190515 44193918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03510 230 384 Calmodulin-binding Proteins AT2G22960 26.250 1.28e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03510 K16297 - gmx:100819443 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03510 1 44190515 44193918 Spst1g03510 1 44190515 44193918 ECH