Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03505 ATGATAACTTTGTTGGACCTCTACCATGTTCTCACGGCTGTGGTACCGCTCTACGTCGCCATGATCCTCGCCTACGGCTCCGTCAAGTGGTGGAAGATCTTCACGCCGGACCAATGCTCCGGCATCAACCGCTTCGTCGCGCTCTTCGCGGTGCCACTCCTCTCCTTCCACTTCATCTCCACCAACAACCCCTACGCCATGAACTACAAGTTCATAGCGGCGGATTCGCTTCAGAAAGCCATAGTCCTCGCTGTGCTCTTCGTCTGGTGCAGGACCAGCTCAAGGGGCTCTCTCGAATGGTCCATCACGCTCTTCTCCCTCTCCACGCTCCCCAACACGCTCGTTATGGGGATCCCATTGCTCAAGGGCATGTACGGGAACGCGTCGGGGACCCTCATGGTCCAGATAGTGGTGCTTCAGTGCATCATCTGGTACACTCTGATGCTGTTTTTGTTTGAGTATAGGGGTGCGAGACTTCTCATCGTGGAGCAGTTTCCCGACACTGCAGGGTCCATTATCTCGTTCAAGGTTGACTCTGATATCTTGTCCTTGGATGGGAAGGAACCGCTTCAGACTGAGGCTGAAGTTGGTGACGATGGGAAGCTTCATGTTACTGTCAGAAAGTCCACTAGCTCGCGCTCTGAGATATTCTCGCGGCGCTCGCATGGTCCTAACTCAGTTTCGTTGACTCCGAGGCCTTCCAATTTGACCAATGCAGAGATTTACTCGCTGCAGTCTTCGAGGAATCCCACGCCTAGAGGGTCGAGTTTCAACCACACGGACTTCTACTCGATGGTGAATAATGGGAGGAACGTGAGTCCGAGGCAGAGTAGTTTTGGGGGGGTGGGTTTTGATGAGGAGAGTGGTGTGAGGGGTAATGGGGGCGCAGGAGGGTACCCTGCACCTCACAATGCGGGGATTTTTTCTCCGGTGGGGAAGAAGAAGGGTGGTGGTGGAGAAGGTGGAGGGAAGGATCTTCACATGTTTGTGTGGAGTTCGAGCGCTTCTCCGGTATCGGAAGGTGGGATCCATGTGTTCAGAGGTGGGGATTATGGGAACGACCAGCTTCCTGTTGGTGGGGTGGCTCACCAGAAAGATTATGATGATTTTGGTCACGATGAGTTTAGCTTCGGGAACAGAACCGTGGCTAATGGGGTGGACAAGGAAGGGCCAGTACTTTCCAAGCTTGGTTCAAGTTCCACGGCTGAGCTTCACCCTAAAGCACAAGGAGAATCCAAACCTACGTCCATGCCACCCACAAGTGTTATGACAAGACTTATTCTGATTATGGTTTGGAGAAAGCTGATTAGGAACCCCAACACATATTCCAGCCTCTTTGGTCTCACTTGGTCTTTGATCTCATTCAAGTGGAATGTTGTTATGCCTGCGATTGTTGCTCGATCCATATCCATTTTATCTGATGCTGGGCTTGGGATGGCAATGTTTAGCCTTGGGTTATTCATGGCATTGCAACCAAAGATTATTGCATGTGGAAACTCGGTTGCTTCCTTTGCCATGGCAGTTCGTTTCCTCACTGGACCTGCTGTCATGGCTGTGGCTTCAATAGTTGTAGGGCTCAGAGGAGTTCTGTTGCACATTGCTATTGTACAGGCTGCTCTGCCGCAAGGGATTGTCCCTTTTGTGTTTGCCAAGGAATACAACGTTCATCCTGACATCCTTAGCACCGGGGTTATATTTGGGATGCTAATTGCTCTTCCTATTACACTAGTTTACTACATTTTGCTTGGGCTTTGA 1755 0.5111 MITLLDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYKFIAADSLQKAIVLAVLFVWCRTSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGNASGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFKVDSDILSLDGKEPLQTEAEVGDDGKLHVTVRKSTSSRSEIFSRRSHGPNSVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNNGRNVSPRQSSFGGVGFDEESGVRGNGGAGGYPAPHNAGIFSPVGKKKGGGGEGGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNDQLPVGGVAHQKDYDDFGHDEFSFGNRTVANGVDKEGPVLSKLGSSSTAELHPKAQGESKPTSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLISFKWNVVMPAIVARSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03505 584 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 584 - -
Spst1g03505 584 MobiDBLite consensus disorder prediction 397 418 - -
Spst1g03505 584 MobiDBLite consensus disorder prediction 213 234 - -
Spst1g03505 584 NCBIfam auxin efflux carrier 1 584 IPR014024 -
Spst1g03505 584 Pfam Membrane transport protein 9 579 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03505 Spst-Chr1 44101310 44104184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03505 1 575 Organic Solute Cotransporters AT1G73590 65.512 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03505 K13947 - gmx:100820506 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03505 1 44101310 44104184 Spst1g03505 1 44101310 44104184 ECH