Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03499 ATGCTAGTCACTGTTGAAGTTGCCGCTGGTCTTCATCCTACAGCAAACCTAGTCACACCTGGACCATATGGCCTTATATTTGCTTCATTTGTGCCCTTTTTCTTTGACATTCCAGTTTCAACACGGTTTCGTGTATTTAGCTTTTTCTTCTCGGACAAGTCATTCATATATCTAGCTGGCGTTCAGCTTCTTTTGTCATCATGGAAAAGGTCCATCTTACCAGGAATGTGTGGCATCCTTGCTGGTTCCTTGTACCGTTTAAATGTCTTTTACATCCGCAAAGCAAAGTGCATCGCGGAGTGGCTATTGGCTACCTCATTTTCAATAGTGGAGTGCTTTTCATGTGCGGATGATGTGGCCATTTTCACAACCCAGAATATGGCATTTTGCACTCTCTGGTTTGGTGTCTCATTTGGTGACATTTCCGGTGTTGATGTGGAGTTTCAGTCTAACCTCATGACAGTGCTCTTTTCTATTCCCATGGCACTGCTCTGTATTAGATATCGATATGGTCTCTGCATGCAAGTCTTCTTTCCCAGAGTTTATCACGTCATTCTTTTCACGAATTACATTGCCATCTATGGGGAGTCCAAGTGCAGCATCATCAACAAGGAATGTAGTTGGGAATTTACCTTCCTATCCAACTCGCCAAATGGAGGCAAGTTTTACGCCGTAATTCTTTTATGGTTTGATTTGCATATTTTAGGCAGCTATGCATCTTTTATTTTGATCACCCCATCAGCTTTGTATGCTGCCATGATATTTGAAGCTGCTGGTCCTCCAGTATCTTCAATGCAAACTGAACTTGTTACAAGGAACTACCCTGCTCCAATGCAATCTGCAGTAGAACCATCGGAGGACTCCATCACTACTCTTGTCTCGATGGGCTTTGACAGGAATTCTGCCAGACAAGCCCTGGTGCAGGCCAGAAATGATGTCAATGTGGCTACCAACATCCTATTGGAGGCACAGTCTCACTAA 981 0.4363 MLVTVEVAAGLHPTANLVTPGPYGLIFASFVPFFFDIPVSTRFRVFSFFFSDKSFIYLAGVQLLLSSWKRSILPGMCGILAGSLYRLNVFYIRKAKCIAEWLLATSFSIVECFSCADDVAIFTTQNMAFCTLWFGVSFGDISGVDVEFQSNLMTVLFSIPMALLCIRYRYGLCMQVFFPRVYHVILFTNYIAIYGESKCSIINKECSWEFTFLSNSPNGGKFYAVILLWFDLHILGSYASFILITPSALYAAMIFEAAGPPVSSMQTELVTRNYPAPMQSAVEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03499 326 Gene3D - 261 325 - -
Spst1g03499 326 SUPERFAMILY UBA-like 279 323 IPR009060 GO:0005515
Spst1g03499 326 PANTHER RHOMBOID-RELATED PROTEIN 3 103 - -
Spst1g03499 326 Pfam UBA/TS-N domain 285 320 IPR015940 -
Spst1g03499 326 SMART uba_6 285 322 IPR015940 -
Spst1g03499 326 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 283 323 IPR015940 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03499 K25216 - gmx:100777938 153.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03499 1 44003661 44010154 Spst1g03499 1 44003661 44010154 ECH