Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03495 ATGTCATCTGAGAAGAACTGTGTATCAAAACTGGAGATGCAAAAGGATTGCAGAGTTTATTGTCTCCTAGATTTGCCTGACTGGACCTTGGATTGCATTCTTGAGTGCCTTTCACCACTGGATTTGTTTAGAGTGGCACAAGTGTGTACCAGTTTGAGGCACAAAACCAGAAGTGATGCTTTGTGGGAGAAAATTATCAAGCAGAAATGGGGTAGGCTTCTTGGTGATGTTGCTTACCAAGAGTGGCAGTGGCACACAACAAAGATAGCAAACACACAAAGCATCCTGTTACTTCAGCAGAATCAGAGTGGATCATGTGGCTCTTTCAGTGGTGTTTGGCCTTTCCTTAACTTTCATTCTTATTTGGAACACTTCATTGACTTGATTACCTTGTTCAAAAATTGTTCAAAAATGGCTTTGTATGTCTGTCTTGAAAGTGGCCGCTTCTGGTTTCCTGTTCAAGTGTATAAGACTGCAAATCTATTCTGTTATGATGCCATAGTCAGCTATAACTCTAGAACAGACACCTTCAAGGCAAGGTCTCCAACTGGTGAGTGGCGAATGATTGAAGAAAATATTCAGTGGGGTAGGTTGAGATTATCAACAATTGAAACTTCCCCAAGAGAGTTTTATATGTCTAACTGTATGAATGATTTGAAACCTGGAGATCAAATTGAGATTCAGATGAAAAGACGCAAAGAATCCCCTTATAATTGGTGGTATGCTGTAATTGGTCACTTGGAAACATGCGACCAGGATGTGAATCATTGCCGTTGCCAATACAGTGACAAGTTGGTAGTGGAGTTCAAGCAATATCAGTCTGCTAGTAGAAATAAAAGATCAGTGTTGAATAGAAACAGGTACGAGGAAAGGGTCTCGTTGCTTCGCTGGTTCGGTGGAATCAGAAAACTTGACAAGGAGGAGGAGATTGAAAAGTGGACGAAGCTCTTTGCATCTAGATAA 963 0.4091 MSSEKNCVSKLEMQKDCRVYCLLDLPDWTLDCILECLSPLDLFRVAQVCTSLRHKTRSDALWEKIIKQKWGRLLGDVAYQEWQWHTTKIANTQSILLLQQNQSGSCGSFSGVWPFLNFHSYLEHFIDLITLFKNCSKMALYVCLESGRFWFPVQVYKTANLFCYDAIVSYNSRTDTFKARSPTGEWRMIEENIQWGRLRLSTIETSPREFYMSNCMNDLKPGDQIEIQMKRRKESPYNWWYAVIGHLETCDQDVNHCRCQYSDKLVVEFKQYQSASRNKRSVLNRNRYEERVSLLRWFGGIRKLDKEEEIEKWTKLFASR 320
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03495 320 Gene3D - 8 96 - -
Spst1g03495 320 SMART fbox_2 25 65 IPR001810 GO:0005515
Spst1g03495 320 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Spst1g03495 320 PANTHER ESTS AU081301(E20138) 3 319 - -
Spst1g03495 320 Pfam F-box domain 23 64 IPR001810 GO:0005515
Spst1g03495 320 SUPERFAMILY F-box domain 17 73 IPR036047 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst1g03495 Spst-Chr1 43965534 43967076 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03495 - - vun:114165017 555.829