Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03491 ATGGACAACCTTAAACCCGGTGGCAATATTTCTCTGTTGAACTTGCCAGAACCCATATTGGATTGCGTTCTAAAGCTCCTTTCACCAATGGAACTCGTTACTATGTCTGAAGTGTGTATTTGTTTAAGGGATAGATGTCGAAGTGAACCTTTGTGGGAAGTCCACATAAAGCAGAAATGGGGTGGATTCATTGGTGATGTTGCATACAAGGAGTGGCAATGGCATATCACAACAGCTAAGGAGAGAGGAAACAACCAATTGAATCAACAGAACTATCAGAATGGATCATTGGGATCTTTCAGTGGTACTTGGCCTGTGTTACACCTCAGATCATATCTAGAAGATTGCAGACATCTTATTAGCTCATTGGGAAATAGCTTTATGATGACTTTGTATTTCTCTCTAGAGAATGGCAAGTTCTGGTTTCCAGCTCAAGTCTACAGGGGAGCATTGGTTCGTGATGCCTTAGTTAGATATGATTCCAAAACTGATAACTTTCAAGCAAGACAACAAAATGGTGGTTGGCATGTGATGGGGAACAACATCCAATGGAAAATCCTTAGAGCTCCCCCAGTTGATACCCCTCCATGTGTTCGATACGTCTCTGATTGTTTGCAAGACTTAAAACCTGGGGATCATATCGAGATCCAACGGAAATCAAGAAGAGAAATCCCTTATGATTGGTGGTATGCTGTTATTGGTCACATGGAATCATGTAATGAAAACCAGAACTTCTGCCAATGTCGTTACTCGGATACATTAATGTTGGAGTTCAAGCAATATTCTCACGGATCAAGCATGAGACGAGTAAAGCTATTAAGAAACGGGGAACAATATGAAGAAGCAAGTGGATGCTACGGAGGAATTAGAAAGCTTGTGAGTGAGGAGGAGATCCAGAGATGGGAGGAGCTCTTGCCGCCACCGTGTCAAACTCCTGTATACATAGCTTGA 951 0.4217 MDNLKPGGNISLLNLPEPILDCVLKLLSPMELVTMSEVCICLRDRCRSEPLWEVHIKQKWGGFIGDVAYKEWQWHITTAKERGNNQLNQQNYQNGSLGSFSGTWPVLHLRSYLEDCRHLISSLGNSFMMTLYFSLENGKFWFPAQVYRGALVRDALVRYDSKTDNFQARQQNGGWHVMGNNIQWKILRAPPVDTPPCVRYVSDCLQDLKPGDHIEIQRKSRREIPYDWWYAVIGHMESCNENQNFCQCRYSDTLMLEFKQYSHGSSMRRVKLLRNGEQYEEASGCYGGIRKLVSEEEIQRWEELLPPPCQTPVYIA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03491 316 PANTHER ESTS AU081301(E20138) 7 306 - -
Spst1g03491 316 SUPERFAMILY F-box domain 8 66 IPR036047 GO:0005515
Spst1g03491 316 ProSiteProfiles F-box domain profile. 9 55 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03491 Spst-Chr1 43953324 43954749 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03491 - - pvu:PHAVU_001G122600g 545.043