Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03488 ATGGAAAAGAAGGAAATGAATCATGATTTCTCCACTGAGATTTTGGTTGCTGAAGTATCTTTTAAATTTTCTGTCATGGCAATCCTTAAGATTACCAAAAAGCACCATAAGCGTTTCAACAACCCTTTCCCTTCTTCAGTTTCAACCACCATCCCCTATGTCCAAGGTTCTCTCTTCTTCAATTCCAAAAGAGTTCCTTCGGATCAGACCTTCTCAATTGGCAGTGATTTTCAGCTTTCTTGGACCTCCAAGAATGGAGGGCACCTCTCAATATCGCACCTTTCTCAACAAACCAGACCTATTTGGTCTACCATCCCCGGTCAGGCTTTTGTCTCGGCTGCACTGGTTGACACAGAAGTGGAAGAAAGTAGAGGATCCTTTCTTGTCAAAGACAAAGATGTTCATATGGTTTGCAATCACCAAACCATTGAGGATATTAAGATTATTGAGGATATTGGGGTGATGAATAGTCAATTTGATCATCATTTGAAATGTGAAGTGGCAGTTTCTCCTTCTGTGTATCAAGGGTTGGAAAAGAAAACTGAATCACAGGAGATTCAGCTTCCTACTTTGATGATCACAGGAAGGCTTTTCAATATGAGTAAGAAGAGTAAAAGGTTTCAAAAGTATGGCATTCAAGCAACTATGCAATTTGAGGCAAAAGGACCCTCTGTATATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACCAACCATGAGGTCTCGTTTCAAGTGAAGATTGAGAAACCTAACTTCATCTCCCGCAACCAAGTCCCCAAAACAGTTTCAGGAGTGTACCAGGGATTCAAGAGGAGGCTGAGTAATAGGAAAAAGAGACTGGGTTGGTATTGGTACCTTTCAAGGCCAAGAGGGTTTGTGCTAGTCTCTTCAGTAGAGGAAGAGATAGGAGACTTGGATATCCCAAAACCAGAAGAGTTCAATAGAATTTGGTTGACATATGCAAGTGATGAGAATGAGAGGTTTTATGGATTTGGGGAGCAGTTTTCTCACATGAACTTCAAAGGCAAAAGGGTGCCCATATTTGTTCAAGAACAAGGTATTGGCAGAGGAGATCAACCTATTACCTTGGCTGCTAACTTGATTAGTTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCATTTTACATAACATCAAAAATGAGGTCTGTCTGCCTTGAAGGATATGATTATACTGTCTTTGATCTTACTAGAATTGACAGAGTACAGATACAGATACATGGAAACTCAGTTGAAGGGCGGATATTGCATGGAAACTCACCTTGTGAACTGATTGAACGTTTTACAGAAACCATTGGAAGACTACCTGAGCTTCCAGAGTGGATTATATCTGGTGCTATAGTTGGAATGCAAGGTGGCACGGAGGCTGTACGTCATGTATGGGATGAACTAAGGACTTATGATGTTCCTATCTCGGCATTTTGGTTGCAGGATTGGGTAGGACAGAGAGAAACATTGATTGGTTCACAGCTCTGGTGGAATTGGGAAGTGGATTCACAAAGATATTGGGGATGGAAGGAACTTATTGATGATCTTAGCTCTCAGAATATAAAAGTTATGACATATTGCAATCCCTGTCTAGCTCCGGTTGATAAGAAACAAAACAAAAGGAGAAACCTCTTTGAGGAAGCAAAACTGTTGGACATATTGGTAAAAGACAGCAATGGAAATTCATACATGGTTCCAAACACGGCCTTTGATGTGGGAATGCTAGATCTCACGCACCCAAAAACGGCAACTTGGTTCAAGCAGATTCTTGGAGACATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAGAGCCTTCCAGTTGATGCTGTTCTATATTCAGGTGAAGATCCTATTTCTGCTCATAACAGATACCCGGAACTATGGGCCAAAATTAATAGAGAGCTTGTGGAAGAATGGAAAAGTAACTCCTTGGACAAAGTGAAGAAAGATCAAGAAGACGGTTTGGTTTTCTTCATGAGGGCTGGTTTTAGAGATAGCCCCAAGTGGGGGGTGCTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAACAAATGATGGAATAAAGAGTTCTGTTGTTGGCCTACTGAGCAGTGGAATTTCTGGCTACTCCTTCAATCACAGTGACATTGGAGGATATTGTACAGTAAACTTGCCTATAGTTAAATATAATAGAAGTGAAGAATTGCTTTTGCGGTGGATGGAGCTAAATTCTTTTACCATAGTCTTCCGTACCCATGAAGGAAACAAACCATCATGCAATAGCCAGTTTTACTCAAACCAGAAAACAATGTCACACTTTGCACGTTCTGCAAAAGTATACAAAGCATGGAAATTTTACCGAATTCAACTGGTGAAGGAAGCTGCACAGAAAGGATTGCCTGTATGCCGCCATCTATTTCTCCATTATCCAAATGATGAACGCGTGCATCATTTGAGTTATCAGCAGTTTTTGGTTGGTTCAGAATTCCTAGTGGTGCCTGTCCTCGACAAAGGAAAGAAAAAAGTAAAAGCTTATTTTCCATTGGGGGAGAGTAGCAATTGGGTCCATATCTGGACAGGCAAAGTATTCACCAAAGAAGGAAGTGAAGAATGGGTAGAAGCTCCAATAGGATATCCTGCTGTATTTGTTAAGGATGGCTCCCTCATTGGAGAAACATTTTTGAATAACCTAAGAAGTTTAGGCATTCTTTAA 2724 0.4101 MEKKEMNHDFSTEILVAEVSFKFSVMAILKITKKHHKRFNNPFPSSVSTTIPYVQGSLFFNSKRVPSDQTFSIGSDFQLSWTSKNGGHLSISHLSQQTRPIWSTIPGQAFVSAALVDTEVEESRGSFLVKDKDVHMVCNHQTIEDIKIIEDIGVMNSQFDHHLKCEVAVSPSVYQGLEKKTESQEIQLPTLMITGRLFNMSKKSKRFQKYGIQATMQFEAKGPSVYARYWVLFNQKTNHEVSFQVKIEKPNFISRNQVPKTVSGVYQGFKRRLSNRKKRLGWYWYLSRPRGFVLVSSVEEEIGDLDIPKPEEFNRIWLTYASDENERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLISYRAGGDWSTTYAPSPFYITSKMRSVCLEGYDYTVFDLTRIDRVQIQIHGNSVEGRILHGNSPCELIERFTETIGRLPELPEWIISGAIVGMQGGTEAVRHVWDELRTYDVPISAFWLQDWVGQRETLIGSQLWWNWEVDSQRYWGWKELIDDLSSQNIKVMTYCNPCLAPVDKKQNKRRNLFEEAKLLDILVKDSNGNSYMVPNTAFDVGMLDLTHPKTATWFKQILGDMVDDGVRGWMADFGESLPVDAVLYSGEDPISAHNRYPELWAKINRELVEEWKSNSLDKVKKDQEDGLVFFMRAGFRDSPKWGVLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYSFNHSDIGGYCTVNLPIVKYNRSEELLLRWMELNSFTIVFRTHEGNKPSCNSQFYSNQKTMSHFARSAKVYKAWKFYRIQLVKEAAQKGLPVCRHLFLHYPNDERVHHLSYQQFLVGSEFLVVPVLDKGKKKVKAYFPLGESSNWVHIWTGKVFTKEGSEEWVEAPIGYPAVFVKDGSLIGETFLNNLRSLGIL 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03488 907 Gene3D - 836 888 IPR013780 -
Spst1g03488 907 SUPERFAMILY Glycosyl hydrolase domain 804 888 - -
Spst1g03488 907 PANTHER SULFOQUINOVOSIDASE 26 906 - -
Spst1g03488 907 CDD GH31_glucosidase_YihQ 443 781 IPR044112 -
Spst1g03488 907 CDD GH31_N 313 443 - -
Spst1g03488 907 SUPERFAMILY (Trans)glycosidases 434 802 IPR017853 -
Spst1g03488 907 SUPERFAMILY Galactose mutarotase-like 311 431 IPR011013 GO:0003824|GO:0005975|GO:0030246
Spst1g03488 907 Gene3D Glycosidases 430 835 - -
Spst1g03488 907 Pfam Glycosyl hydrolases family 31 426 893 IPR000322 GO:0004553|GO:0005975
Spst1g03488 907 Gene3D glycosyl hydrolase (family 31) 272 427 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03488 324 879 Glycoside Hydrolase AT3G45940 24.155 4.64e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03488 - - gmx:100779005 1690.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03488 1 43910204 43915199 Spst1g03488 1 43910204 43915199 ECH