LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g03486	ATGGCGAGCACCCACATTGGGAATGCCGGAGACCCCGACGCCAAGTCCTTCAAGCCTCGCCCCAAGAAACCCTCCGACGACTTCATCACCCTCTTCCACGGCTCCGATCCGGTTCGCGTCGAGCTCACGCGCCTCCAAAACGAACTCCGAGAGAAAGATAGGGAGCTTGGGGATGCACTTGCGGAAATTAAGTCATTGAGGAATTCGGAGCGTCTTAAGGAAAAGGGGGTTGAAGAGCTAACAGATGAGCTGAACAAGGTGGATGAAAAGCTAAAAGCTGCTGAAGTTCTTCTGGAAAGTAAGAACCTTGAAAAAAAAAAAATCAATGAGGAGAAAAGGGCAGCACTGGCTGCACAATTTGCTGCGGAAGCCACGCTTCGAAGAGTTCATGCTGCACAGAAAGACGATGAAATGCCTCCTATTGAAGCTATTATTGCGCCCCTGGAGGCAGAGCTCAAGCTTGCTAGGATGGAGGTGGCGAAGCTGCAGGATGACAACAGGGCCCTAGATCGGCTAACCAAATCAAAGGAAGCTGCACTTCTTGAGGCTGAGAGAACGGTTCAGATTGCTTTGGCAAAAGCATCTTTGGTTGATGATCTACAAAACAAAAACCAAGAGTTGATGAAACAGATTGAAATATGCCAGGAAGAGAACAAAATCCTGGACAAAATGCTTCGGCAAAAGGTTGCTGAAGTTGAAAAACTAACCCAAACTGTTCGGGAACTTGAAGAGGCAGTCTTGGCTGGTGGGGCTGCTGCTAATGCTGTCCGCGATTACCAGCGCAAAGTGCAAGAGATGAATGAGGAAAGGAAAATTTTAGAGCGGGAAGTAGCTCGTGCCAAAGTTACTGCAAACAGGGTTGCGACTGTAGTTGCAAATGAGTGGAAAGATGCTAATGATAAAGTGATGCCTGTGAAGCAGTGGCTAGAAGAAAGAAAATTTTTTCAGGGTGAGATGCAACAATTACGTGATAAATTGGCTATAGCTGAGCGCACTGCAAAAGCAGAGGCACAAATGAAGGAAAAATATCAATTGCGCTTCAAAGTTTTGGAAGAAAGGGTTAAGACATCTAATGGTAATTCCAAATTCACTGTATCAGATGGAAGAAACATTGCTGCTGGGCCTTCACGGCGACAGTCTTTTGGTGGATCTGAGAGTATCTCTGCATCTTCTTCCAATGGATATCTAACGAGGAAAACCTCAATTTCAAGATCAGGGTCCTTAAGATCAAATAATGCTAATGTGTTACTGAAACATGCCAAACTTTCATCTAGATCATTTGATGGCGGTAGTAGAAACTTGGAGAGAGAGAGGCCAACTTCAGATGCAAATGGGGTAGATAACATGCCAACAAACACCAATAATCAGAACGTCACCAGTGAAACTACTACTCATGAGAAGAGTGCAAATGGTATTTCGGTAAAAAAATCTAAAGCTGTAAATGAAGACTATGTTTCAGGAATGCTGTATGACATGTTGCAAAAGGAGGTTATATCTTTGAGGAAAGCTTGTCATGAAAAGGACCAGACTCTTAAAGACAAGGATGATGCAATAGAGATGTTGGCAAAGAAGGTTGATACTTTGAACAAGGCTATGGAAGTTGAGGCCAGAAAAATGCGAAGGGAAGTTGCTTCTATGGAGAAGGAAGTTGCTGCAATGCGGATAAGCAAGGAAAATGATCATAGGGCACGCCGAGCAAGTGCTCCTAGGGGGGCTGTAAATTCCCATTCATTTTCTGTCAGGAATGCACGTAACTTTTAG	1761	0.4458	MASTHIGNAGDPDAKSFKPRPKKPSDDFITLFHGSDPVRVELTRLQNELREKDRELGDALAEIKSLRNSERLKEKGVEELTDELNKVDEKLKAAEVLLESKNLEKKKINEEKRAALAAQFAAEATLRRVHAAQKDDEMPPIEAIIAPLEAELKLARMEVAKLQDDNRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEENKILDKMLRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKILEREVARAKVTANRVATVVANEWKDANDKVMPVKQWLEERKFFQGEMQQLRDKLAIAERTAKAEAQMKEKYQLRFKVLEERVKTSNGNSKFTVSDGRNIAAGPSRRQSFGGSESISASSSNGYLTRKTSISRSGSLRSNNANVLLKHAKLSSRSFDGGSRNLERERPTSDANGVDNMPTNTNNQNVTSETTTHEKSANGISVKKSKAVNEDYVSGMLYDMLQKEVISLRKACHEKDQTLKDKDDAIEMLAKKVDTLNKAMEVEARKMRREVASMEKEVAAMRISKENDHRARRASAPRGAVNSHSFSVRNARNF	586

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g03486	586	Coils	Coil	305	339	-	-
	Spst1g03486	586	MobiDBLite	consensus disorder prediction	359	395	-	-
	Spst1g03486	586	MobiDBLite	consensus disorder prediction	572	586	-	-
	Spst1g03486	586	Coils	Coil	511	556	-	-
	Spst1g03486	586	MobiDBLite	consensus disorder prediction	558	586	-	-
	Spst1g03486	586	PANTHER	MICROTUBULE-ASSOCIATED PROTEIN 70-2	23	570	IPR009768	GO:0007010\|GO:0008017
	Spst1g03486	586	MobiDBLite	consensus disorder prediction	444	470	-	-
	Spst1g03486	586	Coils	Coil	197	245	-	-
	Spst1g03486	586	Coils	Coil	42	69	-	-
	Spst1g03486	586	MobiDBLite	consensus disorder prediction	1	31	-	-
	Spst1g03486	586	MobiDBLite	consensus disorder prediction	15	29	-	-
	Spst1g03486	586	MobiDBLite	consensus disorder prediction	426	470	-	-
	Spst1g03486	586	Coils	Coil	77	118	-	-
	Spst1g03486	586	Coils	Coil	256	283	-	-
	Spst1g03486	586	Pfam	Microtubule-associated protein 70	26	576	IPR009768	GO:0007010\|GO:0008017
	Spst1g03486	586	Coils	Coil	145	172	-	-
	Spst1g03486	586	MobiDBLite	consensus disorder prediction	377	395	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g03486	Spst-Chr1	43876662	43881205	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g03486	-		-	gmx:100814485	983.015

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst1g03486	1	43876662	43881205	Spst1g03486	1	43876662	43881205	ECH