Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03474 ATGGCTGAATCGTCGGAAGATTTCTCGGTGGTTGTTTTGGCGTCGGATCTCGGCGTCGATGCGCGACCCTTCCTCGAACATCAACAGCAACAAGAAGAAGATAATTGGCACGACTGTTCTCAGTATCTCTTCCCCGATGAAGATTTCAACGATCTCGATCAGTTGCAATTCCTCCGCCTCCAAGGCACTGACAAAAACTCCAATCGCATTCTTCGTATCGTTGGCAAGTACTTCCCAGCAACTGTGGTGAGTGCTGAACGACTAAAGAGGTATGTGTCTCACAAGATTTGCAGTGAGTTGCAGGATGAGTCATTCTGTATTGTTTACATGCACACCACCGTTCAGAAAGAGGATAATTCCCCTGGCTTAACAATCTTAAGGTGGATTTATGAGGAACTTCCTACTGATTTCAAGGACAGGCTTAAAACTGTGTATTTCATCCACCCTGGTCTTCGGTCCCGGCTAGTCATGGCTACTGTTGGTCGCTTTTTCTTGAGTGGAGGATTATATTGGAAGATCAAGTATGTAAGCCGGCTTCAGTACCTCTGGGAAGATATAAAGAAAGGAGAGATTGAGATTCCGGATTTTGTGAAAAGTCATGATGATATTCTGGAGCATAGGCCACTGACAGATTATGGCATTGAACCTGATCCCTTTCACTTGACTGGGATACCTTCACCTACCTACTCATTTGGCAAGTACGAGGAGAGATGGGCGGGAAGAGATTACGTGTCTTAG 738 0.4566 MAESSEDFSVVVLASDLGVDARPFLEHQQQQEEDNWHDCSQYLFPDEDFNDLDQLQFLRLQGTDKNSNRILRIVGKYFPATVVSAERLKRYVSHKICSELQDESFCIVYMHTTVQKEDNSPGLTILRWIYEELPTDFKDRLKTVYFIHPGLRSRLVMATVGRFFLSGGLYWKIKYVSRLQYLWEDIKKGEIEIPDFVKSHDDILEHRPLTDYGIEPDPFHLTGIPSPTYSFGKYEERWAGRDYVS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03474 245 Gene3D - 46 192 IPR036865 -
Spst1g03474 245 Pfam Divergent CRAL/TRIO domain 68 201 IPR001251 -
Spst1g03474 245 SMART sec14_4 51 202 IPR001251 -
Spst1g03474 245 SUPERFAMILY CRAL/TRIO domain 54 191 IPR036865 -
Spst1g03474 245 CDD SEC14 46 198 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03474 Spst-Chr1 43616010 43617753 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03474 - - gmx:100527837 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03474 1 43616010 43617753 Spst1g03474 1 43616010 43617753 ECH