Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03467 ATGTTTTCTTCTGCAATTTCTCTGAAGCCCTTCCTTCAGTCCCTCGTTATTGATCGTTGTACTCTGAGCTCAACTGCTGCAACCAGGTGGGAGTGTTTGGGGTTTAACAAGCCAGAATATTTCAGTACCAAGAGAGTGTTGCGTGCTGGGGGGTTCAAGCTGAGTTGCTTGGTTGATAACAGAGAAATGGATGTGGAATCACCATCATCATCATCATCTTTTGTGGACGATGCTGCCGTGAGCTTAGAAGAGGATTTAGGGGAGCCAAGTATTTCTACAATAGTGATGAATTTCGAGAATAAGTTTGATCCTTTTGGAGCAATTAGTCCCCCACTTTACCAAACGGCTACTTTTAAGCAGCCCTCTGCAGTAGAAAACGGTCCCTATGACTATACCAGAAGTGGAAATCCGACGCGGGATGCTTTAGAAAGTTTACTGGCAGAACTTGATAAAGCAGATAGAGCCTTGTGCTTCACCAGCGGAATGGCTGCTTTGAGTGCTGTTGTTCATCTTGTTGGAACTGGTGAGGAAATTGTTGCTGGAGATGATGTATATGGGGGCTCAGATAGGTTGCTGTCTCAAGTAGTTCCAAGGACTGGAGTTGTGGTGAAACGGGTAAATACAAGTGATCTGGATGAGGTTGCATTTGCCATTGGACCTGCGACGAAGCTTGTGTGGCTGGAGAGTCCAACCAATCCCCGGCTACAAATTTCTGATATTCGAAAAATATCAGAGATGGCTCATTCACATGGTGCTCTTGTGTTAGTGGACAATAGTATAATGTCACCTGTGTTGTCCCGGCCATTGGAACTTGGAGCAGATATTGTCATGCACTCAGCTACAAAATTTATTAGTGGACATAGTGACATTATGGCTGGTGTGCTTGCTGTGAAGGGTGAAGAGTTGGGAAAGGAATTGTATTTCTTGCAAAATGCGGAGGGTTCAGGCTTAGCCCCATTTGACTGTTGGCTTTGTTTGCGAGGAATCAAGACAATGGCCCTGAGAATTGAAAAGCAACAGGATAATGCTCAAAAGATTGCTGAGTTCCTTGCCTCCCATGCTCGAGTGAAGAAAGTGAATTATGCTGGCTTGCCTGATCATCCCGGTCGTGATTTACACTATTCTCAGGCAAAGGGTGCAGGATCTGTGCTTAGCTTCTTGACTGGTTCACTTGCACTTTCAAAGCATATCGTTGAAACTACCAAATACTTCAGCATAGCCGTCAGCTTTGGAAGTGTGAAGTCTCTTATCAGCATGCCATGCTTTATGTCACATGCAAGCATACCTGCTGAAGTTCGTGAGGCCAGGGGTTTAACTGAAGATCTTGTACGTATATCTGTGGGGATTGAGGACGATACAGAGGTACGAGCCTATAGAACAGATCCTGTTCAAGTAAGGGGAGAAAGAGGAGGTTCAACTTTTGAGGCATATATGCCCAAAGGAGGTCCAAACATGGCCAATGCGTATCCCCTAGCTTTTCGTAGGATAAATGTTTCTCATTACTCTTCTTTGTTTCTTTGGTGTGCTTCAGCCCACTTTACCTTTACCATGTGCATGTCACCAAAATGTATGACGAGGTTCATCCTAATGACTTTTGTTCTTTTTATTGTTGCACTTAACAGGAAGTTCCCTCAACAGCATGTCTTAGAACAGCAGAACACCTTAAACTGCTGTGCTCTTGATAATCTTGAGTAG 1695 0.4437 MFSSAISLKPFLQSLVIDRCTLSSTAATRWECLGFNKPEYFSTKRVLRAGGFKLSCLVDNREMDVESPSSSSSFVDDAAVSLEEDLGEPSISTIVMNFENKFDPFGAISPPLYQTATFKQPSAVENGPYDYTRSGNPTRDALESLLAELDKADRALCFTSGMAALSAVVHLVGTGEEIVAGDDVYGGSDRLLSQVVPRTGVVVKRVNTSDLDEVAFAIGPATKLVWLESPTNPRLQISDIRKISEMAHSHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFISGHSDIMAGVLAVKGEELGKELYFLQNAEGSGLAPFDCWLCLRGIKTMALRIEKQQDNAQKIAEFLASHARVKKVNYAGLPDHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISVGIEDDTEVRAYRTDPVQVRGERGGSTFEAYMPKGGPNMANAYPLAFRRINVSHYSSLFLWCASAHFTFTMCMSPKCMTRFILMTFVLFIVALNRKFPQQHVLEQQNTLNCCALDNLE 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03467 564 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 274 288 IPR000277 GO:0019346|GO:0030170
Spst1g03467 564 FunFam Cystathionine gamma-synthase homolog 89 331 - -
Spst1g03467 564 NCBIfam cystathionine beta-lyase 92 453 IPR006238 GO:0004121|GO:0071266
Spst1g03467 564 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 91 453 IPR000277 GO:0019346|GO:0030170
Spst1g03467 564 FunFam Cystathionine beta-lyase 332 460 - -
Spst1g03467 564 Gene3D Aspartate Aminotransferase, domain 1 332 459 IPR015422 GO:0003824
Spst1g03467 564 Pfam Cys/Met metabolism PLP-dependent enzyme 93 454 IPR000277 GO:0019346|GO:0030170
Spst1g03467 564 SUPERFAMILY PLP-dependent transferases 98 455 IPR015424 -
Spst1g03467 564 CDD CGS_like 106 451 IPR000277 GO:0019346|GO:0030170
Spst1g03467 564 Gene3D - 90 331 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03467 Spst-Chr1 43533165 43542516 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03467 K01760 - gmx:100812354 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03467 1 43533165 43542516 Spst1g03467 1 43533165 43542516 ECH