Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03466 ATGTCAAGTGGATCAGTGAGACGGGTTTCCCGTCAAGATATTCAGCTGGTGCAAAATCTCATAGAACGATGTCTTCAACTATATATGAGCCAGAAAGAAGTGGTGGAAACACTACTAGCTCAAGCAAAAATAGAGCCTGGTTTCACCGAACTAGTTTGGCAAAAGCTTGAAGAAGAAAATGAGGAGTTCTTCAAGGCTTATTATGCAAGATTGGTTTTGAAGCAGCAAATAATGCAATTCAACAAATTGCTGGACCAGCAAGTCCAATTAATGCAGTTACACTCAACTGCTGTTGCATCACTGCCTACAACTAACGGGTCACATATCCCAGAAGTTTCATCACTACCTAATTCTAATGGATCACATATCCCTGCTATACCTGAGAATCCAGCATGCTACACTGCAGACCGAACCCAAACAAGTTTGAAGCCAGAAAACATGCAACATCCTGTTGATTCCAGATTATCTAATGTGTTTAATAATGGCGGGTCATCTCTACATACAAGTATGCATGCTGCAGTTGATATGTCAACTCATGGCAATAGGATTAATGGCCCTCCCAGCATGCTTTCTGCTCAAAGCGCAAACATGGGTCTGATACAAGGAATGAATGGTGGGATGATCAAATCTGAACCGGGATATTCTGGTTGTTCTCCTTACATGTTTGGTACTGATGGAAATGTCCTGGAGGCACGCCCAACTATTGGTGGCAGTTCAGTTACGTCATTCACTAATGTGGAGTCCAACTCACATTCACTGAACGAGGCAGTCCTAGATCCAGACACTTCTTCATTTGGATTTCTGGGGCAGATTCCCAGAAATTTTAGCCTTTCAGATCTGACTGCTGATTTTTCTCAGAGTTCTGATATACTGGAGACCTATTCTAGGTCACCCTTCCTAGCTACGGATAATGAGAACTTCCTTGACAGAGGAGAACAAGACAATAATAGGCTGGACTCCATATCAGAAGGCTTAAGTTATGAAGACTTCGGGAGTGAATAG 1002 0.4251 MSSGSVRRVSRQDIQLVQNLIERCLQLYMSQKEVVETLLAQAKIEPGFTELVWQKLEEENEEFFKAYYARLVLKQQIMQFNKLLDQQVQLMQLHSTAVASLPTTNGSHIPEVSSLPNSNGSHIPAIPENPACYTADRTQTSLKPENMQHPVDSRLSNVFNNGGSSLHTSMHAAVDMSTHGNRINGPPSMLSAQSANMGLIQGMNGGMIKSEPGYSGCSPYMFGTDGNVLEARPTIGGSSVTSFTNVESNSHSLNEAVLDPDTSSFGFLGQIPRNFSLSDLTADFSQSSDILETYSRSPFLATDNENFLDRGEQDNNRLDSISEGLSYEDFGSE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03466 333 PANTHER OS02G0137100 PROTEIN 11 290 IPR006476 -
Spst1g03466 333 NCBIfam TIGR01589 domain 14 69 IPR006476 -
Spst1g03466 333 Pfam Plant protein 1589 of unknown function (A_thal_3526) 17 69 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03466 Spst-Chr1 43523309 43528921 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03466 - - gmx:100787548 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03466 1 43523309 43528921 Spst1g03466 1 43523309 43528921 ECH