Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03463 ATGAACCCAGGGCTCGTTGCAGGTGCAACCTTGCTTGCCCTCTTGGCCATCATCTTCTCCTTCTTCAACCCTCAAGCCCTGTTTTCCCCGCCTCATGTTCCAGGATCTAAGGATCACCTCCAGTCTTCACGGATACTCCATGTCACCGGCGCCCTCGGCCCTGAGAGTCTGGTTTTTGATTCTCACGGAGGAGGGCCCTACACCGGCGTCGCCGACGGCCGGATTTTGAAGTGGGAAGGGGAGGACTCAGAGTGGACTGAATTTGCTGTCACCAGTTCCAATAGGTCGGGTTGTATACGTCCATTTGCACCAGAGTTGGAGCATGTTTGTGGGAGGCCTTTAGGACTAAAATTTGATAAGAAAAATGGAGATCTCTACATTGCTGATGCCTACCTAGGCCTAAAAGTAGTGGGATCAACAGGGGGTTTGGCCACCGAAGTGGTGACAGAAGTTGAAGGCCAACCCTTGCACTTCACTAATGACATGGACATCAGTGAAGATGAAGATGTGATTTACTTCACTGATTCAAGCACAATCTTCCAGAGAAGGCAATTTATGCTTGTACTTCTTAGTGGAGACAGGACCGGAAGGTTAATGAAATATGACAAGTCAACAAAAGAAGTGAAGGTCTTATTACGTGACCTTGCTTTTCCTAATGGTGTTGCTTTAAGCAAAGATGAATCGTTTCTTCTGGTAGCAGAAACCACTACTTGCAAGATCTTGCAACTTTGGCTTCGTGGACCTAAGGCTGGTCAAGTGGATACTTTTGCCGAATTACCCGGTTTTCCAGACAATGTTAGAAGAAATTCCGAAGGGCATTTCTGGGTAGCTCTGCATGCAAAGGGAAGTCCTTTCGCGAAGTGGATTTCTTCCAATCCCTGGGCGGGAAAGGCATTGCTAAAGATTGGATTTAACTTCAAACAGCTGCACTCATCATTTGCAGGGTGGAAGCCTCATGCTGTTGCTGTAAAGCTAAGTGACAGAGGAGAGATTCTAGAAGTCTTGGAAGACTGTGAAGGGAAGGCCTTAAAGTTCATCAGCGAAGTGGAAGAGAAAGATGGGAAGCTTTGGATTGCATCTGTGCTGATGCCTTTCATTGGCATTTATGGTTTGTGA 1116 0.4713 MNPGLVAGATLLALLAIIFSFFNPQALFSPPHVPGSKDHLQSSRILHVTGALGPESLVFDSHGGGPYTGVADGRILKWEGEDSEWTEFAVTSSNRSGCIRPFAPELEHVCGRPLGLKFDKKNGDLYIADAYLGLKVVGSTGGLATEVVTEVEGQPLHFTNDMDISEDEDVIYFTDSSTIFQRRQFMLVLLSGDRTGRLMKYDKSTKEVKVLLRDLAFPNGVALSKDESFLLVAETTTCKILQLWLRGPKAGQVDTFAELPGFPDNVRRNSEGHFWVALHAKGSPFAKWISSNPWAGKALLKIGFNFKQLHSSFAGWKPHAVAVKLSDRGEILEVLEDCEGKALKFISEVEEKDGKLWIASVLMPFIGIYGL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03463 371 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
Spst1g03463 371 Gene3D - 37 370 IPR011042 -
Spst1g03463 371 PANTHER STRICTOSIDINE SYNTHASE-RELATED 11 364 - -
Spst1g03463 371 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 38 371 - -
Spst1g03463 371 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Spst1g03463 371 SUPERFAMILY Calcium-dependent phosphotriesterase 19 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03463 Spst-Chr1 43477129 43479960 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03463 - - gmx:100815025 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03463 1 43477129 43479960 Spst1g03463 1 43477129 43479960 ECH