Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03456 ATGGCTCCAATCGCTGCAAGGATTCTCGGTTCCATGTCGCGAAGTGCGCTTGCGCTCCCTCGCCGCTGGCTCCGCTCCTCCTTCTCCTCCGCCTCCGCAGCGGTGGCGGAAGCGGAGAGCACGGAGATGAAGGACTACGCCGATTACCGGCGCTCACTGTACGGACAGATCACGCACAAGGCTCTCCTCGTTGACGCGGTTGGCACGCTCGTTCTTCCTTCGCAACCCATGGCTCAGATATATAGGAAGATTGGTGAAAAGTATGGAGTTGAGTATTCGGAGGATGAAATACTGTTCAGATACAGAAGAGCGTATGGCCAGCCTTGGGGTAAATCTCGACTCAGATATGTTAATGATGGCAAGCCCTTCTGGCAATACATAGTTAGTTATTCTACCGGCTGTTCAGATCCTCAATACTTTGAAGAACTTTATAACTATTATATGACAGACAAGGCATGGCACCTCAATGATCCTGGTGCAGAAGAAGTATTTAGAGTTCTTAGAAAATCAGGTGTGAAATTAGCTGTTGTGTCAAATTTTGACACTAGATTAAGACCTCTCCTGCGGGCATTAAATTGTGACAATTGGTTTGATGCGGTAGCAGTGTCAGCCGAGGTTGCGGCCGAGAAACCAAATCCAACTATATTTCTCAAAGCATGTGAGCTGTTGGATGTAAAACCTGAGGATGCTGTTCATGTTGGGGATGATCGCAGAAATGATATATGGGGTGCCAGGGATGCAGGCTGTGATGCTTGGCTTTGGGGAAGCGATGTTCACTCCTTTAAGGAGGTATTTAAAATCTTCATATCTCTTTAA 816 0.4767 MAPIAARILGSMSRSALALPRRWLRSSFSSASAAVAEAESTEMKDYADYRRSLYGQITHKALLVDAVGTLVLPSQPMAQIYRKIGEKYGVEYSEDEILFRYRRAYGQPWGKSRLRYVNDGKPFWQYIVSYSTGCSDPQYFEELYNYYMTDKAWHLNDPGAEEVFRVLRKSGVKLAVVSNFDTRLRPLLRALNCDNWFDAVAVSAEVAAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFKEVFKIFISL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03456 271 PANTHER - 22 266 - -
Spst1g03456 271 SUPERFAMILY HAD-like 60 262 IPR036412 -
Spst1g03456 271 CDD HAD_dREG-2_like 160 267 - -
Spst1g03456 271 NCBIfam HAD-IA family hydrolase 168 248 IPR006439 -
Spst1g03456 271 SFLD Haloacid Dehalogenase 60 253 - -
Spst1g03456 271 NCBIfam HAD-IA family hydrolase 149 250 IPR006439 -
Spst1g03456 271 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 215 235 IPR006439 -
Spst1g03456 271 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 197 213 IPR006439 -
Spst1g03456 271 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 59 70 IPR006439 -
Spst1g03456 271 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 167 180 IPR006439 -
Spst1g03456 271 Gene3D - 64 255 IPR023214 -
Spst1g03456 271 NCBIfam HAD hydrolase, REG-2-like, family IA 60 253 IPR011949 -
Spst1g03456 271 Gene3D - 75 148 IPR044924 -
Spst1g03456 271 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 60 253 - -
Spst1g03456 271 Pfam Haloacid dehalogenase-like hydrolase 68 251 IPR041492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03456 Spst-Chr1 43403527 43406817 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03456 - - gmx:100789672 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03456 1 43403527 43406817 Spst1g03456 1 43403527 43406817 ECH