Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03449 ATGGCTCAATTGCTATCATCCTCTTACTCCTTGGCTACCTGCCCTAGAAATAAACCTTACTTAAAACCTTTTAAGCAATGCTCAACACCATTTTCTGTTGCGGTTTCTTGCAATAGTTCCAAACCTTCATTTAGAGGGCTTTTCTTGCAAGAACAGAAGCTAAGAAAAGGTTCTCTAGTAGTACATGCTGCTGCAGTTTCAACTAGCCAGGGAACCCCAGTTCAAACTAGCACTGGTGACCCTTTTAAACCACAGCGAGTCATGGTCATTGGTGGAGATGGATACTGTGGTTGGGCAACTGCCCTCCACCTTTCTAACAAGGGTTATGAGGTTGCCATTGTTGACAGCCTTGTGCGACGACTTTTTGATCACCAGCTTGGACTGGAATCTCTAACACCAATTTCCTCCATCCAGAATCGCCTTCATTGTTGGAAATCTCTCACTGGAAAAAGTATTGAGCTCTACATTGGAGACATATGTGATTTTGGGTTCTTATCTGAAACCTTTAACTCATTTGAACCTGATGCTGTTGTCCACTTTGGGGAACAGAGGTCTGCTCCCTACTCTATGATAGATCGATCAAGAGCTGTGTATACCCAGCAAAACAATGTTATTGGGACACTGAATGTGCTCTTTGCCATAAAAGAGTTCAGAGAGCAGTGTCATCTAGTTAAGCTTGGGACCATGGGTGAATATGGGACCCCTAATATTGATATTGAAGAAGGTTATATTACCATTACTCATAATGGAAGGACAGACACTTTGCCATATCCCAAGCAAGCTAGCTCATTCTATCACCTAAGCAAGGTACATGATTCACATAACATAGCTTTCACTTGCAAAGCTTGGGGTATTCGAGCAACTGACTTGAATCAAGGAGTGGTATATGGGGTAAGGACAGATGAGACTGCAATGCATGAAGATCTGTATAACAGGTTTGATTACGATGGAATATTTGGGACTGCATTGAACCGGTTCTGTGTTCAGGCTGCCGTTGGTCATCCACTGACTGTGTATGGTAAAGGAGGCCAGACTAGGGGCTTCCTTGACATAAGAGATACAGTTCAATGTGTTGAGCTTGCCATCGCAAACCCTGCAAAGCCTGGGGAGTTCCGAGTCTTCAACCAATTTACTGAGCAGTTTTCAGTCAATCAGCTTGCCAACCTTGTTACCAAAGCTGGTGAGAAGCTGGGTCTTGATGTGAAAACTATCAATGTGCCAAACCCACGAGTTGAGGCAGAAGAGCATTACTACAATTGCAAGAACACTAAACTTGTTGATCTAGGACTGAGACCACACTTTCTTTCAGATTCTCTCCTTGATTCACTGCTGAACTTTGCTGTTCAGTACAAGGATCGTATTGACACAAAACAAATCATGCCTAGTGTGTCTTGGAAAAAAATTGGGGTCAAAACAAAAACTGTTACAGCTTAG 1434 0.4296 MAQLLSSSYSLATCPRNKPYLKPFKQCSTPFSVAVSCNSSKPSFRGLFLQEQKLRKGSLVVHAAAVSTSQGTPVQTSTGDPFKPQRVMVIGGDGYCGWATALHLSNKGYEVAIVDSLVRRLFDHQLGLESLTPISSIQNRLHCWKSLTGKSIELYIGDICDFGFLSETFNSFEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVIGTLNVLFAIKEFREQCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEDLYNRFDYDGIFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVQCVELAIANPAKPGEFRVFNQFTEQFSVNQLANLVTKAGEKLGLDVKTINVPNPRVEAEEHYYNCKNTKLVDLGLRPHFLSDSLLDSLLNFAVQYKDRIDTKQIMPSVSWKKIGVKTKTVTA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03449 477 CDD SQD1_like_SDR_e 86 466 - -
Spst1g03449 477 Pfam NAD dependent epimerase/dehydratase family 87 374 IPR001509 -
Spst1g03449 477 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 456 IPR036291 -
Spst1g03449 477 Gene3D - 293 454 - -
Spst1g03449 477 Gene3D - 86 377 - -
Spst1g03449 477 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 83 465 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03449 1 476 Acyl Lipid Metabolism Gene Families AT4G33030 78.144 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03449 K06118 - gmx:100816616 904.434