Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03444 ATGGGGAGAAAACTAAGCTTCATTCTGCTCTTCCTTGTTCAAATGCTGCTTGTTCTTGTAGAAAACCATGCTGAGATTGTTGTGTCCACAGTTGAGGCTCCAGCCCCACAGCCTCACAAGACCACCACCCACTTTGCTTCACCACCTCCTCACAAACCCACCACCCACTTTGCTCCTCCTCCTCCTCCTCCTCAGCCTAACAAAAACACCACCCCCAATCATGGCATCACTGAAGGCAGTCTTAAACCACAAGAATGTGGTCCACGTTGCACAGCTAGATGTTCAAATACGCAGTACAAGAAACCGTGCCTGTTTTTCTGCCAAAAGTGCTGTGCCAAGTGCTTGTGTGTGCCTCCTGGAACTTATGGCAACAAGCAGGTTTGCCCATGCTACAACAACTGGAAGACCAAAAGAGGAGGACCCAAATGCCCCTGA 435 0.4966 MGRKLSFILLFLVQMLLVLVENHAEIVVSTVEAPAPQPHKTTTHFASPPPHKPTTHFAPPPPPPQPNKNTTPNHGITEGSLKPQECGPRCTARCSNTQYKKPCLFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTKRGGPKCP 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03444 144 Pfam Gibberellin regulated protein 85 144 IPR003854 -
Spst1g03444 144 MobiDBLite consensus disorder prediction 35 49 - -
Spst1g03444 144 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 144 - -
Spst1g03444 144 MobiDBLite consensus disorder prediction 52 69 - -
Spst1g03444 144 MobiDBLite consensus disorder prediction 35 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03444 Spst-Chr1 43200739 43202628 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03444 - - gmx:100818749 232.646