Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03440 ATGGCTATGTTATTGTCTACAATCGTTCCTTCTACCAAGCTTGTAATCTTTAACAACAATACACAAGAGCGTGCACTTCCAAGTATTTCTCATTTCTCAGTTACTAGCAAGCGCTTTAAGAAATTATCGTCCTTGATTGCTTTTGCGGTGAAGGGTGACTCCTCTCACGCTAAAGCCACAAGGAGAGATAGTAGAAACCCATTGTTGAGTGAGGGGAGAGATGAAGATGAAGCTAGAGGACCCATCTGCCCTGGTTGTGGAGTCTTCATGCAAGATAAGGACCCTAACCTTTTAGGGTATTACCAACCAAGGAAAGTGAAAGTGGAAGAGTTTTCAGAAGAGGATAATGATGTGTTTGGTGATGATGATGGTGTTTATGTAGAAGAAGAAGAAGATGATGATGATAAAGTGGGGGTTTTGAATGAAAGTGAAATTAAGCTTGGAGAAGAAAGTGAGGAGTTAGAAGGTAAGTTTGATTGGGATTCTGATGACTGGGAAGCTAAGTTACCGAGTGAAGATGATGTGGAGTTGGAATTGGATGGGTTTGCACCTGCAGGAGTTGGGTATGGTAACATGACTGAAGAGTACTTGGAGAAGATAAAGAAAAAGAAGGTGTCCAAAGCTGAGAAGAAGAGGATGGCTAAGGAGGCTAACAGGGAGGAAGAAGAGGTTACCGTGTGTGCTAGGTGTCATTCCTTGAGAAACTATGGCCATGTGAAGAACCAAACGGCGGAGAATTTGATACCGGATTTTGATTTCAATAGGTTAATTTCGATGCGGTTGATGAACCCTTCTGGAAGTGGCAGTGCTACTGTTGTTGTCATGGTTGTGGATTGTGTTGATTTTGATGGTTCATTCCCTCGGATTGCTGTGAAATCCTTGTTTCAAGCATTGGAAAGAATACAGGATAACTCAAAGCGGGCCAAGAAGCTGCCAAAGCTTGTTCTTGTGGCAACAAAGGTTGATCTCCTTCCGTCCCAGGTTTCTCCTACAAGATTAGATAGATGGGTTCGAAACCGTGCAAGATCTGGAGGAGCACCTAAGCTAAATGGGGTTTATTTGGTCAGTTCAAGGAAGGATTTAGGCGTAAGGAATTTGTTGTCCTTCGTGAAGGATTTGGCTGGTCCTCGTGGGAATGTCTGGGTGATTGGATCTCAAAATGCAGGGAAGTCTACTCTGATCAATGCATTTGCAAAGAAACAAGGAGCAAAAGTTACAAAGCTAACAGAAGCTCCAATTCCTGGGACAACACTTGGGATCTTGAGAATTGCAGGAGTTTTGCCCGCTAAGACTAAGATGTTTGACACTCCAGGGCTCTTGCACCCATATTTAATGTCAACAAGATTAAATCGGGATGAGCAAAAGATGGTTGAGATCCGGAAGGAACTCCGGCCTCGGTCATATAGAATTAAGGTAGGACAAGCTATACACATTGGTGGCTTGACAAGACTTGACCTTGTTGAAGCCTCTGTTGAAACAATATATGTCACTGTGTGGGCATCATCAAATGTTTCCCTTCACATGGGGAAAATAGAAAATGCTGATGAGGTTTGGAGAAAGCATGTCGGTATCAGGTTACAGCCTCCCATTGGTAATGACCGCTCTGCTGAATTAGGAACATGGCAAGAAAGAGAAGTAAAAGTGTCTGGGACTAGTTGGGATGTCAACAGCATTGACATAGCAATAGCGGGTTTAGGTTGGTTCTCATTGACTCTCAAAGGTGAAGCAACCACGAAATTGTGGGCCTTTGATGGGGTTGAAGTAACTTTGAGAGAGCCTTTGGTGCTTGACCGGGCACCATTCCTTGAGAAGCCAGGATTTTGGTTACCTAAAGCCATCTCTGATGCTATTGGCAACCAAACCAAACTTGAAGCTCAAAGAAGAAAACAACTTGACAATGAGGATACGGAATACGTGGGGGCAGGGGCAGGGTTATCTGCATGA 1944 0.4367 MAMLLSTIVPSTKLVIFNNNTQERALPSISHFSVTSKRFKKLSSLIAFAVKGDSSHAKATRRDSRNPLLSEGRDEDEARGPICPGCGVFMQDKDPNLLGYYQPRKVKVEEFSEEDNDVFGDDDGVYVEEEEDDDDKVGVLNESEIKLGEESEELEGKFDWDSDDWEAKLPSEDDVELELDGFAPAGVGYGNMTEEYLEKIKKKKVSKAEKKRMAKEANREEEEVTVCARCHSLRNYGHVKNQTAENLIPDFDFNRLISMRLMNPSGSGSATVVVMVVDCVDFDGSFPRIAVKSLFQALERIQDNSKRAKKLPKLVLVATKVDLLPSQVSPTRLDRWVRNRARSGGAPKLNGVYLVSSRKDLGVRNLLSFVKDLAGPRGNVWVIGSQNAGKSTLINAFAKKQGAKVTKLTEAPIPGTTLGILRIAGVLPAKTKMFDTPGLLHPYLMSTRLNRDEQKMVEIRKELRPRSYRIKVGQAIHIGGLTRLDLVEASVETIYVTVWASSNVSLHMGKIENADEVWRKHVGIRLQPPIGNDRSAELGTWQEREVKVSGTSWDVNSIDIAIAGLGWFSLTLKGEATTKLWAFDGVEVTLREPLVLDRAPFLEKPGFWLPKAISDAIGNQTKLEAQRRKQLDNEDTEYVGAGAGLSA 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03440 647 Coils Coil 200 225 - -
Spst1g03440 647 CDD YqeH 227 439 - -
Spst1g03440 647 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 41 635 - -
Spst1g03440 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 489 IPR027417 -
Spst1g03440 647 MobiDBLite consensus disorder prediction 56 77 - -
Spst1g03440 647 Gene3D - 266 442 IPR027417 -
Spst1g03440 647 Pfam 50S ribosome-binding GTPase 380 452 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03440 Spst-Chr1 43161578 43165582 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03440 - - gmx:100805561 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03440 1 43161578 43165582 Spst1g03440 1 43161578 43165582 ECH