Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03433 ATGCCTTCCAACCTTTCCTTCACCTTCTGTACTCTGCCTTTCAAAATAATACTCCTTATTCTCACCCTTTTTTTTCTCATACAAAGCACTTTCTTCATCAAAGTAGAAACCATGGTGTCAAAACCTGGTGGCTTCTATGAACAAGGGAGCTTTCCATCAATCAAAATCCTCATACTTTTACTCCTTAATTCTATACTTCATAAAGCCAACTCAGGCTGCAATAATAACTCTGCTTCAAATTCCTTAACTCCATTTCCACCTCATGAGATCCTCTCATCATTGCAAACACTGCCTCTAGATGGCTACTTTAGCCTGAGTAATAATGAGGATGCTGCCAAGGACTTTGGCAACATACACCATTTTCCTCCCCTAGCAGTGCTGCATCCGAAAGCAGTTTCTGATATATCACGCACCATAAAGCATGTTTTTGAAATGGGGTTTGCCTCAGAGTTGAAGGTTGCTGCTAGAGGCCATGGCCATTCCTTGCAAGGCCAGGCACAAGCACATGGAGGCCTAGTCATTAACATGGAGTCACTGCAGGGCCCTGAAATGAAAGTTCACATTGGAGAGTTCCCTTATGTGGATGTCTCAGGGGGAGAGTTGTGGATAAACATTCTGCATGAAACTCTTAAACATGGGTTGGCACCAAAGTCATGGACAGATTACCTTCACCTCACTGTTGGAGGCACTCTTTCAAATGCTGGTATAAGCGGGCAAGCCTTCAAACATGGACCTCAGATCAATAACATCTTCCAGCTTGAAGTGGTCACAGGAAAAGGAGAGGTGGTTACTTGCTCAGGGAACCGAAATGCTGACCTTTTTCATGGTGTACTTGGAGGTCTTGGTCAATTTGGCATCATCACAAGGGCTAGAATTTCTCTTGAATCAGCACCAAAGATGGTGAAATGGATTAGAGTGCTCTACTCAGAATTCTCTATATTTACAAGGGATCAAGAGTATTTAATATCACTTAAAAACACATTTGATTATATTGAAGGGTTTGTGATCATAAATAGAACAGGCATCCTTAACAACTGGAGATCATCCTTTGATCCCAAAAGCCCACTTCAAGCAAGTCAATTCAATTCTGATGGGAGAACCTTCTACTGTCTTGAGATGGCAAAATACTTCAACCCTGATGAAGAAGAATTCATGAATCAGAGTGTTGATCACCTACTGTCAAAGCTGAGTTACATCCAACCAACACTCTTCCTATCAGAAGTTTCTTACGTGGAATTCCTGGACAGAGTGCATGTTTCTGAGAAAAAGTTAAGTGCAAAAGGCTTGTGGGAAGTCCCCCATCCCTGGCTGAACCTTTTCATCCCAAGGAGTGAGATTCATGACTTTGCTGAAGAAGTATTTGGCAATATTCTTAAGGACACAAGTAATGGCCCCATTCTCATTTACCCCGTCAACCAAACGAGGTGGAACAGTAAGACATCTTTGGTTACCCCAGAGGAAGATGTTTTTTACCTGGTGGCATTCCTATCCTCAGCAGTCCCAAATTCCACAGGTGCTGATAGTTTAGAACAGATTGTGGCCCAAAACAAAAGGATCATAGAGTTCTACAGCCATGCCCAACTGAAAGTGAAGCAATACCTTCCCCATTACAGCACACAGGAAGAATGGGAAGCCCACTTTGGGTCACAGTGGGAGGCATTCGTGGAAAGAAAAAAGGCCTATGACCCACTCGCACTGCTTGCCCCTGGCCACAGAATCTTTCAAAAGGCAGTGTCTGCTTCATGCTAG 1749 0.4328 MPSNLSFTFCTLPFKIILLILTLFFLIQSTFFIKVETMVSKPGGFYEQGSFPSIKILILLLLNSILHKANSGCNNNSASNSLTPFPPHEILSSLQTLPLDGYFSLSNNEDAAKDFGNIHHFPPLAVLHPKAVSDISRTIKHVFEMGFASELKVAARGHGHSLQGQAQAHGGLVINMESLQGPEMKVHIGEFPYVDVSGGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFKHGPQINNIFQLEVVTGKGEVVTCSGNRNADLFHGVLGGLGQFGIITRARISLESAPKMVKWIRVLYSEFSIFTRDQEYLISLKNTFDYIEGFVIINRTGILNNWRSSFDPKSPLQASQFNSDGRTFYCLEMAKYFNPDEEEFMNQSVDHLLSKLSYIQPTLFLSEVSYVEFLDRVHVSEKKLSAKGLWEVPHPWLNLFIPRSEIHDFAEEVFGNILKDTSNGPILIYPVNQTRWNSKTSLVTPEEDVFYLVAFLSSAVPNSTGADSLEQIVAQNKRIIEFYSHAQLKVKQYLPHYSTQEEWEAHFGSQWEAFVERKKAYDPLALLAPGHRIFQKAVSASC 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03433 582 FunFam Cytokinin dehydrogenase 2 300 533 - -
Spst1g03433 582 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 298 574 IPR015345 GO:0009690|GO:0019139|GO:0050660
Spst1g03433 582 Gene3D - 108 574 IPR016167 -
Spst1g03433 582 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 123 158 IPR006093 GO:0016491
Spst1g03433 582 Gene3D - 176 299 IPR016169 -
Spst1g03433 582 FunFam Cytokinin dehydrogenase 1 174 299 - -
Spst1g03433 582 ProSiteProfiles PCMH-type FAD-binding domain profile. 119 297 IPR016166 GO:0071949
Spst1g03433 582 PANTHER GULONOLACTONE OXIDASE 84 575 - -
Spst1g03433 582 SUPERFAMILY FAD-linked oxidases, C-terminal domain 298 574 IPR016164 GO:0003824|GO:0050660
Spst1g03433 582 Gene3D - 300 533 IPR016170 -
Spst1g03433 582 Pfam FAD binding domain 123 266 IPR006094 GO:0050660
Spst1g03433 582 SUPERFAMILY FAD-binding/transporter-associated domain-like 107 294 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03433 Spst-Chr1 42999720 43002303 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03433 K00279 - gmx:100777568 976.467