Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03430 ATGTCGACGCCCGCCGCGTTCCATGTCCAATCTCCGGTTAACTCGGCCGAGGCGCCGCGGCATTCTTCCTTCCTCCATTTCAACGCCGATTGCTTAAACTCTTCCGCCACCGCCTCTGCTATGCGCACGAGGTCCCGACCGAGGCTCGCCAAACTCCGGAAGCAGTCTGCGTCTCAGCAGGTTAGGTCCCGGGGCAGAGCTTCTGGCGACGACGATGGAGCCGCTGGCGGCTTCAATCCGTTTCGCGCTGATCAGGTAACTGGTAATGACAGTGGATTAGAGAGTGTTTTTTCGAACTGTCGGCGTGATGCTGTTTTTGTGTTTGGCGCCGGGCGGGTTGATTCTGACTCCGGTGGGGATTTGAAGGGGGAAATTAGGAGTGGTGGTGTGGAATTTGTGTTTAGTGCGGGAAAGAATGACGGTGGGAGTGTTACGGAGACGGTTTGTGGTGAGGGAGCGAAGGTGGGGTCGAGTTCGGCGGAGTTGAAGAGTAAGGTGTTTGTTTTTGGTGCTTGTAGAAATAATTTTGATTCTGGCTCAAGTACAGAAAAGGGGAAATGTAGCGTTGGGTTGGAAGATTCGGTTGAGGAGAGGGAGTGTAAGTATGAATTTGGGGGGAGCCATAGTGGTAGAGAGTCGAGTGTCAAGGTGGAGAAGAAGGAGCCTGTTGGCTATGGGTGGAATTCAGATCGTGTAATGGGAGCTTTTGGTGTCAAGATGAATGGTAATAGTGATACAGGTGCTGATCGTTATGATCATTTGGGTAATGGTGATAAGTGTAAGAGTGGATATGCCAATGCTAATGGTATTCCTGCTTCTTATGATGGTGTTCCAGTGCGTAATTTATCAAACGAGATGGAGAAACTTAACATTAAACAGTCAGAGGGTGCTGATATTACTAGGAATTCAATGAATTCACATGCTAATGGTTGTGATACTGGTTTTGTGTTTAGAGGAAATCTGAAGGGTTTTGGTTATTCTAGTGTTACTTCAAGGACTGAAGCTGGTGGTCAGCAATCCTGTGCTCAATCTGCATCGGAGAACGTTGGTGTTCAAAATGGAACTGCTTGTGGTATTGCCTGTGATTCTTCAGGAATACATTGCCCTGAGCCATCCTCTAGTGAGGAAGATGTCAGAGATTCCCAGAGTGGCAAAATTCCAGGATGTTATGTGTCTCAAGATTCAAAAGTGAATGATGCTGCAGCTTCATTTTCCTTCACATCATTTGGTATTGACTCCCATCCAAATTTTTCTGCTTCCATTGGCCATTCCTCGAGTGCAGATGATAAGGGCGATAATTGTTTTGCTAGTACTCCAGAGGCTTCTAAAGAGTCTTTTGTGGACTTCAAACCCCCAACATGGGATCCTTCATGTTTCAAAGACAACTTATTTCCTAAGTTAGCTAAAAAAGTTGAATCCACACAGAAGGGTCGATCATGTAAGGAAAAAGGATCAAAATGTATGAGGCGAAAGTTGAAGTTTCATTCCTTAAACAAGAAACACACAGAGCCAGATCATTCCTCAAATGAAAACAGTTCACTCAAAACCCCTGACTCCTCTGGTGTCCACTCACCAATGGATTTTTCTCCGTATCAAGAAACAACAGCAAGTGATCGAGATGTAAAAGCTTCTAAAGGATTAAATGGTGAGCACTCAGCAATTCCTACTGATTATAAAGGTGAACATTTGCCTACTGTGGGGAGAGAAGATACGAGTACAACTGATAGAAGACATGGAGATCTGGATAATAAAAAATGTGATGGAAATTCATCTGTTGACGATTTTCATTCTTCTGGCCCTGATATAGTCTGTGCTAATTTGAAAACTGAGCAATTCTGCAGTAGTAGAGCAGGAGATTCAGCTGGTGCTGGTGTTGACTTCACCTCAAACACTGAAAGGCAAAAGGATGATATTTTTTGTTTTGTTCCTGGCCTGAATGAATCTACGGGGAAAAATTTTTTGTTTTCTGTATCATCAGCTTTGGATGGTACTCCATCATTAAAGCGTCAACAAAAGAAGAAATTTAGAAGGAAAGTGGGGTGCAATTCTTTTGTTATCTCTCCTCGTGTGAATGGAAAATTTGGATCTTCTGAACAGTTTTCACCACATAACAGTGTCAACATGACATCACATTCTAATGTGATGGATAGATCTCAGATAAATGACCAATTAAAGGAAGGGGATGTTGCATCATCAGATAAAAATATGTCATCAGCCTGTGACAAATGGAGACTCAGGGGGAACCAGGCTCATAAAGATGGTGATCTTTCTAAAGCTGAGGACTTCTACACACTTGGAATAAATTCCGTACCTTCAAATGAAAGATCAGGGTGCTATGTTCAGCCACTTTTACTCTGCTATAGTAACCGTGCAGCAACACGAATGAGTCTTGGAAGAATTAGAGAGGCTCTAGAGGATTGCATGATGGCTACAGCTCTGGACCCTTCGTTTCCGAAAGTACAGATGAGAACTGCTAACTGCCACCTTTTGCTAGGGGAAGTAGAAAATGCTCAGCAGTGTTTTAACAAGTGCATGGAATCAGGTAGTGTTGTTTGTTTGGATCGGAGGGTAATAGTGGAAGCATCTCAAGGTTTACTAAAGGCTCAGGATGTGGTCAAGTGTATAAATAATGCTGCTGAACTTTTAAAAGAGAGGACTTCTGATGCAGCTGTTACAGCTTTAGAACTAGTTTCTAAGGCATTGTCTATAAGTTTATACTCAGAAAAATTGCTGCAAATGAAGGCTGAGGCTCTATGTTTGCTACAAAAGTATGAAGCAGCAATTCAGCTTTGTGAACAAAGTCAGCATTTTGCAGAAAGGAATTTTGTCTTGGCAAACAATTCAGAGAATTCTGATAGTTCCTTATCTGATAGTCACTCAAGTGTAAAGTTGTGGAGGTGGTCATTGATATCCAAATGTTACTTTCGTTTGGGAAGGCTTGAGGCATCACTTAATGTACTAGAGCAATTGCAGCATGTTGTGTCTATCACTGAAAAGTGTGTGATCGATAACATTGAAGATTCGTTATCATTAGCTTCTACTATACGAGAACTTCTAGATCACAAGAGGGCAGGGAATGAAAACTTTAAATTGGGAAAGTATACAGAAGCTGTGGAGAATTACACTGCTGCTTTGTCATGCAATATTAAATCACGTCCTTTTATGGCAATATGTTTCTGCAACCGTGCTGCAGCTCATCAAGCTTTGGGACAAATTGCTGATGCCATTGCAGACTGCAGTGTCGCTATTGCCCTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCCACCTTACTTGAGATGGTTAGAGATTATGAACACGCAGCTTGTGACCTCAAAAGACTTATAGCTATTATTGAAACTCAATCCAATGAAAGGGACAAACAGTCTGACTCACCCAATGGATCAAAAGGTATGAAAGAATCAAGGCAAGCTCATCAACGCCTTCTCTCAGTGGAAGATCAAGCCAAAAAGGGGACACCCTTGGATGTCTACCTCATTTTAGGAATCAAATCAGATGATACAGCAACAGATATCAAGAAGGCATACCACAAGGCAGCTCTTAGACATCATCCAGACAAGGCTGGTCATTTGTTGGCAAGAAGTGAAGTTGGAGATGATGGCCGTGTTTGGAAGGAAATCTCACAGGAGGTGTACAAGGATGCTGATAAGCTTTTCAAAATGATTGGAGAAGCATATGCTGTGCTTTCAGACCCAGCAAAGCGCTCAGAGTATGATTTGGAAGAGGAGATAAGGAAAGCTTGGAAGTTAAATAATAGAGGTGGCACAAGCAGGAGATCTTCAGATGCTTATGGTTATGGAAGATCATATGGTTACAAATCTCCCTCTGACAAAACTTCTAACAGACGAAGTGGATGGGACCAGTGGAAGACATATGGACATTCTTATTCTCGATGGTGA 3924 0.4276 MSTPAAFHVQSPVNSAEAPRHSSFLHFNADCLNSSATASAMRTRSRPRLAKLRKQSASQQVRSRGRASGDDDGAAGGFNPFRADQVTGNDSGLESVFSNCRRDAVFVFGAGRVDSDSGGDLKGEIRSGGVEFVFSAGKNDGGSVTETVCGEGAKVGSSSAELKSKVFVFGACRNNFDSGSSTEKGKCSVGLEDSVEERECKYEFGGSHSGRESSVKVEKKEPVGYGWNSDRVMGAFGVKMNGNSDTGADRYDHLGNGDKCKSGYANANGIPASYDGVPVRNLSNEMEKLNIKQSEGADITRNSMNSHANGCDTGFVFRGNLKGFGYSSVTSRTEAGGQQSCAQSASENVGVQNGTACGIACDSSGIHCPEPSSSEEDVRDSQSGKIPGCYVSQDSKVNDAAASFSFTSFGIDSHPNFSASIGHSSSADDKGDNCFASTPEASKESFVDFKPPTWDPSCFKDNLFPKLAKKVESTQKGRSCKEKGSKCMRRKLKFHSLNKKHTEPDHSSNENSSLKTPDSSGVHSPMDFSPYQETTASDRDVKASKGLNGEHSAIPTDYKGEHLPTVGREDTSTTDRRHGDLDNKKCDGNSSVDDFHSSGPDIVCANLKTEQFCSSRAGDSAGAGVDFTSNTERQKDDIFCFVPGLNESTGKNFLFSVSSALDGTPSLKRQQKKKFRRKVGCNSFVISPRVNGKFGSSEQFSPHNSVNMTSHSNVMDRSQINDQLKEGDVASSDKNMSSACDKWRLRGNQAHKDGDLSKAEDFYTLGINSVPSNERSGCYVQPLLLCYSNRAATRMSLGRIREALEDCMMATALDPSFPKVQMRTANCHLLLGEVENAQQCFNKCMESGSVVCLDRRVIVEASQGLLKAQDVVKCINNAAELLKERTSDAAVTALELVSKALSISLYSEKLLQMKAEALCLLQKYEAAIQLCEQSQHFAERNFVLANNSENSDSSLSDSHSSVKLWRWSLISKCYFRLGRLEASLNVLEQLQHVVSITEKCVIDNIEDSLSLASTIRELLDHKRAGNENFKLGKYTEAVENYTAALSCNIKSRPFMAICFCNRAAAHQALGQIADAIADCSVAIALDGNYAKAISRRATLLEMVRDYEHAACDLKRLIAIIETQSNERDKQSDSPNGSKGMKESRQAHQRLLSVEDQAKKGTPLDVYLILGIKSDDTATDIKKAYHKAALRHHPDKAGHLLARSEVGDDGRVWKEISQEVYKDADKLFKMIGEAYAVLSDPAKRSEYDLEEEIRKAWKLNNRGGTSRRSSDAYGYGRSYGYKSPSDKTSNRRSGWDQWKTYGHSYSRW 1307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03430 1307 SUPERFAMILY TPR-like 1021 1119 IPR011990 GO:0005515
Spst1g03430 1307 Gene3D Tetratricopeptide repeat domain 1017 1141 IPR011990 GO:0005515
Spst1g03430 1307 Gene3D Tetratricopeptide repeat domain 738 852 IPR011990 GO:0005515
Spst1g03430 1307 MobiDBLite consensus disorder prediction 494 588 - -
Spst1g03430 1307 MobiDBLite consensus disorder prediction 37 85 - -
Spst1g03430 1307 Pfam DnaJ domain 1164 1247 IPR001623 -
Spst1g03430 1307 SUPERFAMILY Chaperone J-domain 1150 1246 IPR036869 -
Spst1g03430 1307 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 12 1307 - -
Spst1g03430 1307 Gene3D DnaJ domain 1150 1265 IPR036869 -
Spst1g03430 1307 SUPERFAMILY TPR-like 741 989 IPR011990 GO:0005515
Spst1g03430 1307 MobiDBLite consensus disorder prediction 1124 1147 - -
Spst1g03430 1307 MobiDBLite consensus disorder prediction 509 537 - -
Spst1g03430 1307 CDD DnaJ 1164 1239 IPR001623 -
Spst1g03430 1307 ProSiteProfiles dnaJ domain profile. 1164 1250 IPR001623 -
Spst1g03430 1307 PRINTS DnaJ domain signature 1222 1242 IPR001623 -
Spst1g03430 1307 PRINTS DnaJ domain signature 1166 1184 IPR001623 -
Spst1g03430 1307 PRINTS DnaJ domain signature 1184 1199 IPR001623 -
Spst1g03430 1307 MobiDBLite consensus disorder prediction 1260 1307 - -
Spst1g03430 1307 MobiDBLite consensus disorder prediction 562 588 - -
Spst1g03430 1307 SMART tpr_5 740 773 IPR019734 GO:0005515
Spst1g03430 1307 SMART tpr_5 818 851 IPR019734 GO:0005515
Spst1g03430 1307 SMART tpr_5 1018 1051 IPR019734 GO:0005515
Spst1g03430 1307 SMART tpr_5 908 941 IPR019734 GO:0005515
Spst1g03430 1307 SMART tpr_5 1056 1089 IPR019734 GO:0005515
Spst1g03430 1307 SMART tpr_5 784 817 IPR019734 GO:0005515
Spst1g03430 1307 SMART tpr_5 1090 1123 IPR019734 GO:0005515
Spst1g03430 1307 SMART dnaj_3 1163 1242 IPR001623 -
Spst1g03430 1307 ProSitePatterns Nt-dnaJ domain signature. 1227 1246 IPR018253 -
Spst1g03430 1307 MobiDBLite consensus disorder prediction 1281 1307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03430 Spst-Chr1 42975372 42983552 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03430 K09527 - gmx:100809278 1749.18