Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03429 ATGAACCCAAAATGGAAACTATGTGGGGAAGGAAAACAACAATCTCCCATTGATATCTCAGACAAAGTGGTGCATTTTCCTCAATTGGGTCAACTTGAAAGGGATTACAAACCAGCTCGTGCTGTCCTAAAGAATTCGGGTCATATCATCGAGATGAAATGGAAAGGGAATGCAGGCCAGCTTAACCTTAATGGAACTAACTACAAACTGATTCAATGTCATTGGCACACACCTTCAGAGCACACATTGAATGGAACAAAGTTTGACTTGGAACTGCATGTAGTCCATCAAAATTCTGTAGGAGAGCGTGCTGCCATTGGAATATGGTATAAAATTGGCGATTCAGATCCCTTGCTTTCAGAGCTGCTGGAGAAACTAAAATCACTTGGCGACGAGGATATAGATGTAGGAGAAATAAACCCAGGAATCATCAAGTTTGGAAGCAGATACTACAGATATGATGGTTCTCTTACAACTCCACCATGTACTGAAGGTGTTGTTTGGACAATAATGAAAAAGGTGAGGACAGTCTCAACGGAGCAGTTGAGTGCCTTGAAAGGAGCTATTCGTCATATTCATGAAAGTTTAGGATTGTTGAAGAAAGCAAATTATGGCATATGGGGAAAACCTTGGGGTTCACTTGCAATGACAATGAAATACTCTGTTGAAAAATTGGAGGAAGTGGAGAATAGCAAAAGTATTGGTGGTGATGTTCTGCTATCTGTTGAACAAATCTAA 738 0.4038 MNPKWKLCGEGKQQSPIDISDKVVHFPQLGQLERDYKPARAVLKNSGHIIEMKWKGNAGQLNLNGTNYKLIQCHWHTPSEHTLNGTKFDLELHVVHQNSVGERAAIGIWYKIGDSDPLLSELLEKLKSLGDEDIDVGEINPGIIKFGSRYYRYDGSLTTPPCTEGVVWTIMKKVRTVSTEQLSALKGAIRHIHESLGLLKKANYGIWGKPWGSLAMTMKYSVEKLEEVENSKSIGGDVLLSVEQI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03429 245 ProSiteProfiles Alpha-carbonic anhydrases profile. 1 220 IPR001148 -
Spst1g03429 245 CDD alpha_CA_prokaryotic_like 2 191 IPR041891 -
Spst1g03429 245 Pfam Eukaryotic-type carbonic anhydrase 5 190 IPR001148 -
Spst1g03429 245 SUPERFAMILY Carbonic anhydrase 2 189 IPR036398 -
Spst1g03429 245 SMART Carb_anhydrase_2a 5 196 IPR001148 -
Spst1g03429 245 PANTHER CARBONIC ANHYDRASE 2 191 IPR023561 GO:0004089|GO:0008270
Spst1g03429 245 ProSitePatterns Alpha-carbonic anhydrases signature. 79 95 IPR018338 GO:0004089|GO:0008270
Spst1g03429 245 Gene3D Alpha carbonic anhydrase 1 204 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03429 Spst-Chr1 42966846 42971875 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03429 K01674 - gmx:100306209 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03429 1 42966846 42971875 Spst1g03429 1 42966846 42971875 ECH